Intestinal organoids model human responses to infection by commensal and Shiga toxin producing Escherichia coli.

by Sayali S Karve, Suman Pradhan, Doyle V Ward, Alison A Weiss
Published 2017-01-01

16S rRNA gene survey of microbial communities in Winogradsky columns.

by Ethan A Rundell, Lois M Banta, Doyle V Ward, Corey D Watts, Bruce Birren, David J Esteban
Published 2014-01-01

Dysbiosis in a canine model of human fistulizing Crohn’s disease

by Ana Maldonado-Contreras, Lluís Ferrer, Caitlin Cawley, Sarah Crain, Shakti Bhattarai, Juan Toscano, Doyle V. Ward, Andrew Hoffman
Published 2020-11-01

Metagenomic Sequencing with Strain-Level Resolution Implicates Uropathogenic E. coli in Necrotizing Enterocolitis and Mortality in Preterm Infants

by Doyle V. Ward, Matthias Scholz, Moreno Zolfo, Diana H. Taft, Kurt R. Schibler, Adrian Tett, Nicola Segata, Ardythe L. Morrow
Published 2016-03-01

Center Variation in Intestinal Microbiota Prior to Late-Onset Sepsis in Preterm Infants.

by Diana H Taft, Namasivayam Ambalavanan, Kurt R Schibler, Zhuoteng Yu, David S Newburg, Hitesh Deshmukh, Doyle V Ward, Ardythe L Morrow
Published 2015-01-01

Alzheimer’s Disease Microbiome Is Associated with Dysregulation of the Anti-Inflammatory P-Glycoprotein Pathway

by John P. Haran, Shakti K. Bhattarai, Sage E. Foley, Protiva Dutta, Doyle V. Ward, Vanni Bucci, Beth A. McCormick
Published 2019-05-01

The high prevalence of Clostridioides difficile among nursing home elders associates with a dysbiotic microbiome

by John P. Haran, Doyle V. Ward, Shakti K. Bhattarai, Ethan Loew, Protiva Dutta, Amanda Higgins, Beth A. McCormick, Vanni Bucci
Published 2021-01-01

Alcohol-related changes in the intestinal microbiome influence neutrophil infiltration, inflammation and steatosis in early alcoholic hepatitis in mice.

by Patrick P Lowe, Benedek Gyongyosi, Abhishek Satishchandran, Arvin Iracheta-Vellve, Aditya Ambade, Karen Kodys, Donna Catalano, Doyle V Ward, Gyongyi Szabo
Published 2017-01-01

Correction: Alcohol-related changes in the intestinal microbiome influence neutrophil infiltration, inflammation and steatosis in early alcoholic hepatitis in mice.

by Patrick P Lowe, Benedek Gyongyosi, Abhishek Satishchandran, Arvin Iracheta-Vellve, Aditya Ambade, Yeonhee Cho, Karen Kodys, Donna Catalano, Doyle V Ward, Gyongyi Szabo
Published 2017-01-01

Whole genome characterization of the mechanisms of daptomycin resistance in clinical and laboratory derived isolates of Staphylococcus aureus.

by Anton Y Peleg, Spiros Miyakis, Doyle V Ward, Ashlee M Earl, Aileen Rubio, David R Cameron, Satish Pillai, Robert C Moellering, George M Eliopoulos
Published 2012-01-01

The success of acinetobacter species; genetic, metabolic and virulence attributes.

by Anton Y Peleg, Anna de Breij, Mark D Adams, Gustavo M Cerqueira, Stefano Mocali, Marco Galardini, Peter H Nibbering, Ashlee M Earl, Doyle V Ward, David L Paterson, Harald Seifert, Lenie Dijkshoorn
Published 2012-01-01

Gut microbiota regulation of P-glycoprotein in the intestinal epithelium in maintenance of homeostasis

by Sage E. Foley, Christine Tuohy, Merran Dunford, Michael J. Grey, Heidi De Luca, Caitlin Cawley, Rose L. Szabady, Ana Maldonado-Contreras, Jean Marie Houghton, Doyle V. Ward, Randall J. Mrsny, Beth A. McCormick
Published 2021-09-01

Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease.

by Eliseo Papa, Michael Docktor, Christopher Smillie, Sarah Weber, Sarah P Preheim, Dirk Gevers, Georgia Giannoukos, Dawn Ciulla, Diana Tabbaa, Jay Ingram, David B Schauer, Doyle V Ward, Joshua R Korzenik, Ramnik J Xavier, Athos Bousvaros, Eric J Alm
Published 2012-01-01

Standardized metadata for human pathogen/vector genomic sequences.

by Vivien G Dugan, Scott J Emrich, Gloria I Giraldo-Calderón, Omar S Harb, Ruchi M Newman, Brett E Pickett, Lynn M Schriml, Timothy B Stockwell, Christian J Stoeckert, Dan E Sullivan, Indresh Singh, Doyle V Ward, Alison Yao, Jie Zheng, Tanya Barrett, Bruce Birren, Lauren Brinkac, Vincent M Bruno, Elizabet Caler, Sinéad Chapman, Frank H Collins, Christina A Cuomo, Valentina Di Francesco, Scott Durkin, Mark Eppinger, Michael Feldgarden, Claire Fraser, W Florian Fricke, Maria Giovanni, Matthew R Henn, Erin Hine, Julie Dunning Hotopp, Ilene Karsch-Mizrachi, Jessica C Kissinger, Eun Mi Lee, Punam Mathur, Emmanuel F Mongodin, Cheryl I Murphy, Garry Myers, Daniel E Neafsey, Karen E Nelson, William C Nierman, Julia Puzak, David Rasko, David S Roos, Lisa Sadzewicz, Joana C Silva, Bruno Sobral, R Burke Squires, Rick L Stevens, Luke Tallon, Herve Tettelin, David Wentworth, Owen White, Rebecca Will, Jennifer Wortman, Yun Zhang, Richard H Scheuermann
Published 2014-01-01