Characterizing the Different Effects of Zika Virus Infection in Placenta and Microglia Cells

by Maria del Pilar Martinez Viedma, Brett E. Pickett
Published 2018-11-01

Identification of diagnostic peptide regions that distinguish Zika virus from related mosquito-borne Flaviviruses.

by Alexandra J Lee, Roshni Bhattacharya, Richard H Scheuermann, Brett E Pickett
Published 2017-01-01

Growth and adaptation of Zika virus in mammalian and mosquito cells.

by Lindsey A Moser, Brendan T Boylan, Fernando R Moreira, Laurel J Myers, Emma L Svenson, Nadia B Fedorova, Brett E Pickett, Kristen A Bernard
Published 2018-11-01

Preprocessing of Public RNA-Sequencing Datasets to Facilitate Downstream Analyses of Human Diseases

by Naomi Rapier-Sharman, John Krapohl, Ethan J. Beausoleil, Kennedy T. L. Gifford, Benjamin R. Hinatsu, Curtis S. Hoffmann, Makayla Komer, Tiana M. Scott, Brett E. Pickett
Published 2021-07-01

Peptide arrays incubated with three collections of human sera from patients infected with mosquito-borne viruses [version 3; peer review: 2 approved]

by Maria del Pilar Martinez Viedma, Nurgun Kose, Leda Parham, Angel Balmaseda, Guillermina Kuan, Ivette Lorenzana, Eva Harris, James E. Crowe Jr., Brett E. Pickett
Published 2020-02-01

A RESTful API for Access to Phylogenetic Tools via the CIPRES Science Gateway

by Mark A. Miller, Terri Schwartz, Brett E. Pickett, Sherry He, Edward B. Klem, Richard H. Scheuermann, Maria Passarotti, Seth Kaufman, Maureen A. O’Leary
Published 2015-03-01

A RESTful API for Access to Phylogenetic Tools via the CIPRES Science Gateway

by Mark A. Miller, Terri Schwartz, Brett E. Pickett, Sherry He, Edward B. Klem, Richard H. Scheuermann, Maria Passarotti, Seth Kaufman, Maureen A. O'Leary
Published 2015-01-01

Virus Pathogen Database and Analysis Resource (ViPR): A Comprehensive Bioinformatics Database and Analysis Resource for the Coronavirus Research Community

by Yun Zhang, Edward B. Klem, Wei Jen, Richard H. Scheuermann, Christopher N. Larsen, Sam Zaremba, Sanjeev Kumar, Brett E. Pickett, Douglas S. Greer, Zhiping Gu, Guangyu Sun, Liwei Zhou, Lucy Stewart
Published 2012-11-01

Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains

by Susmita Shrivastava, Vinita Puri, Kari A. Dilley, Erica Ngouajio, Jessica Shifflett, Lauren M. Oldfield, Nadia B. Fedorova, Lihui Hu, Torrey Williams, Alan Durbin, Paolo Amedeo, Sujatha Rashid, Reed S. Shabman, Brett E. Pickett
Published 2018-10-01

Genome-wide bioinformatic analyses predict key host and viral factors in SARS-CoV-2 pathogenesis

by Mariana G. Ferrarini, Avantika Lal, Rita Rebollo, Andreas J. Gruber, Andrea Guarracino, Itziar Martinez Gonzalez, Taylor Floyd, Daniel Siqueira de Oliveira, Justin Shanklin, Ethan Beausoleil, Taneli Pusa, Brett E. Pickett, Vanessa Aguiar-Pulido
Published 2021-05-01

Differing epidemiological dynamics of Chikungunya virus in the Americas during the 2014-2015 epidemic.

by Yi Tan, Brett E Pickett, Susmita Shrivastava, Lionel Gresh, Angel Balmaseda, Paolo Amedeo, Lihui Hu, Vinita Puri, Nadia B Fedorova, Rebecca A Halpin, Matthew P LaPointe, Marshall R Cone, Lea Heberlein-Larson, Laura D Kramer, Alexander T Ciota, Aubree Gordon, Reed S Shabman, Suman R Das, Eva Harris
Published 2018-07-01

Author Correction: Microbiome disturbance and resilience dynamics of the upper respiratory tract during influenza A virus infection

by Drishti Kaul, Raveen Rathnasinghe, Marcela Ferres, Gene S. Tan, Aldo Barrera, Brett E. Pickett, Barbara A. Methe, Suman R. Das, Isolda Budnik, Rebecca A. Halpin, David Wentworth, Mirco Schmolke, Ignacio Mena, Randy A. Albrecht, Indresh Singh, Karen E. Nelson, Adolfo García-Sastre, Chris L. Dupont, Rafael A. Medina
Published 2020-06-01

Microbiome disturbance and resilience dynamics of the upper respiratory tract during influenza A virus infection

by Drishti Kaul, Raveen Rathnasinghe, Marcela Ferres, Gene S. Tan, Aldo Barrera, Brett E. Pickett, Barbara A. Methe, Suman R. Das, Isolda Budnik, Rebecca A. Halpin, David Wentworth, Mirco Schmolke, Ignacio Mena, Randy A. Albrecht, Indresh Singh, Karen E. Nelson, Adolfo García-Sastre, Chris L. Dupont, Rafael A. Medina
Published 2020-05-01

Evaluation of ELISA-Based Multiplex Peptides for the Detection of Human Serum Antibodies Induced by Zika Virus Infection across Various Countries

by Maria del Pilar Martinez Viedma, Stephen Panossian, Kennedy Gifford, Kimberly García, Isis Figueroa, Leda Parham, Laise de Moraes, Lillian Nunes Gomes, Tamara García-Salum, Cecilia Perret, Daniela Weiskopf, Gene S. Tan, Antônio Augusto Silva, Viviane Boaventura, Guillermo M. Ruiz-Palacios, Alessandro Sette, Aruna Dharshan De Silva, Rafael A. Medina, Ivette Lorenzana, Kevan M. Akrami, Ricardo Khouri, Daniel Olson, Brett E. Pickett
Published 2021-07-01

Standardized metadata for human pathogen/vector genomic sequences.

by Vivien G Dugan, Scott J Emrich, Gloria I Giraldo-Calderón, Omar S Harb, Ruchi M Newman, Brett E Pickett, Lynn M Schriml, Timothy B Stockwell, Christian J Stoeckert, Dan E Sullivan, Indresh Singh, Doyle V Ward, Alison Yao, Jie Zheng, Tanya Barrett, Bruce Birren, Lauren Brinkac, Vincent M Bruno, Elizabet Caler, Sinéad Chapman, Frank H Collins, Christina A Cuomo, Valentina Di Francesco, Scott Durkin, Mark Eppinger, Michael Feldgarden, Claire Fraser, W Florian Fricke, Maria Giovanni, Matthew R Henn, Erin Hine, Julie Dunning Hotopp, Ilene Karsch-Mizrachi, Jessica C Kissinger, Eun Mi Lee, Punam Mathur, Emmanuel F Mongodin, Cheryl I Murphy, Garry Myers, Daniel E Neafsey, Karen E Nelson, William C Nierman, Julia Puzak, David Rasko, David S Roos, Lisa Sadzewicz, Joana C Silva, Bruno Sobral, R Burke Squires, Rick L Stevens, Luke Tallon, Herve Tettelin, David Wentworth, Owen White, Rebecca Will, Jennifer Wortman, Yun Zhang, Richard H Scheuermann
Published 2014-01-01