Multi-Label Random Forest Model for Tuberculosis Drug Resistance Classification and Mutation Ranking

by Samaneh Kouchaki, Yang Yang, Yang Yang, Alexander Lachapelle, Timothy M. Walker, Timothy M. Walker, Timothy M. Walker, A. Sarah Walker, A. Sarah Walker, A. Sarah Walker, CRyPTIC Consortium, Timothy E. A. Peto, Timothy E. A. Peto, Timothy E. A. Peto, Derrick W. Crook, Derrick W. Crook, Derrick W. Crook, David A. Clifton
Published 2020-04-01

Pathogen-based precision medicine for drug-resistant tuberculosis.

by Matthias I Gröschel, Timothy M Walker, Tjip S van der Werf, Christoph Lange, Stefan Niemann, Matthias Merker
Published 2018-10-01

Case Report: Disseminated, rifampicin resistant Mycobacterium bovis (BCG) infection in an immunocompromised child [version 1; peer review: 2 approved]

by Simon B. Drysdale, Dominic F. Kelly, Marcus Morgan, Tim Peto, Derrick Crook, Philippa C. Matthews, Timothy M. Walker
Published 2020-10-01

Using hospital network-based surveillance for antimicrobial resistance as a more robust alternative to self-reporting.

by Tjibbe Donker, Timo Smieszek, Katherine L Henderson, Timothy M Walker, Russell Hope, Alan P Johnson, Neil Woodford, Derrick W Crook, Tim E A Peto, A Sarah Walker, Julie V Robotham
Published 2019-01-01

Stringent thresholds in SARS-CoV-2 IgG assays lead to under-detection of mild infections

by David W. Eyre, Sheila F. Lumley, Denise O’Donnell, Nicole E. Stoesser, Philippa C. Matthews, Alison Howarth, Stephanie B. Hatch, Brian D. Marsden, Stuart Cox, Tim James, Richard J. Cornall, David I. Stuart, Gavin Screaton, Daniel Ebner, Derrick W. Crook, Christopher P. Conlon, Katie Jeffery, Timothy M. Walker, Timothy E. A. Peto
Published 2021-02-01

Correction: Corrigendum: Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis

by Phelim Bradley, N. Claire Gordon, Timothy M. Walker, Laura Dunn, Simon Heys, Bill Huang, Sarah Earle, Louise J. Pankhurst, Luke Anson, Mariateresa de Cesare, Paolo Piazza, Antonina A. Votintseva, Tanya Golubchik, Daniel J. Wilson, David H. Wyllie, Roland Diel, Stefan Niemann, Silke Feuerriegel, Thomas A. Kohl, Nazir Ismail, Shaheed V. Omar, E. Grace Smith, David Buck, Gil McVean, A. Sarah Walker, Tim E. A. Peto, Derrick W. Crook, Zamin Iqbal
Published 2016-04-01

Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe [version 1; peer review: 2 approved, 1 approved with reservations]

by Martin Hunt, Phelim Bradley, Simon Grandjean Lapierre, Simon Heys, Mark Thomsit, Michael B. Hall, Kerri M. Malone, Penelope Wintringer, Timothy M. Walker, Daniela M. Cirillo, Iñaki Comas, Maha R. Farhat, Phillip Fowler, Jennifer Gardy, Nazir Ismail, Thomas A. Kohl, Vanessa Mathys, Matthias Merker, Stefan Niemann, Shaheed Vally Omar, Vitali Sintchenko, Grace Smith, Dick van Soolingen, Philip Supply, Sabira Tahseen, Mark Wilcox, Irena Arandjelovic, Tim E. A. Peto, Derrick W. Crook, Zamin Iqbal
Published 2019-12-01

Differential occupational risks to healthcare workers from SARS-CoV-2 observed during a prospective observational study

by David W Eyre, Sheila F Lumley, Denise O'Donnell, Mark Campbell, Elizabeth Sims, Elaine Lawson, Fiona Warren, Tim James, Stuart Cox, Alison Howarth, George Doherty, Stephanie B Hatch, James Kavanagh, Kevin K Chau, Philip W Fowler, Jeremy Swann, Denis Volk, Fan Yang-Turner, Nicole Stoesser, Philippa C Matthews, Maria Dudareva, Timothy Davies, Robert H Shaw, Leon Peto, Louise O Downs, Alexander Vogt, Ali Amini, Bernadette C Young, Philip George Drennan, Alexander J Mentzer, Donal T Skelly, Fredrik Karpe, Matt J Neville, Monique Andersson, Andrew J Brent, Nicola Jones, Lucas Martins Ferreira, Thomas Christott, Brian D Marsden, Sarah Hoosdally, Richard Cornall, Derrick W Crook, David I Stuart, Gavin Screaton, Oxford University Hospitals Staff Testing Group, Timothy EA Peto, Bruno Holthof, Anne-Marie O'Donnell, Daniel Ebner, Christopher P Conlon, Katie Jeffery, Timothy M Walker
Published 2020-08-01