Are there better methods of monitoring MRSA control than bacteraemia surveillance? An observational database study.

by Sarah Walker, Tim E A Peto, Lily O'Connor, Derrick W Crook, David Wyllie
Published 2008-01-01

Selective culture enrichment and sequencing of feces to enhance detection of antimicrobial resistance genes in third-generation cephalosporin resistant Enterobacteriaceae.

by Leon Peto, Nicola J Fawcett, Derrick W Crook, Tim E A Peto, Martin J Llewelyn, A Sarah Walker
Published 2019-01-01

Extended Sequence Typing of Campylobacter spp., United Kingdom

by Kate E. Dingle, Noel D. McCarthy, Alison J. Cody, Tim E.A. Peto, Martin C. J. Maiden
Published 2008-10-01

Patient engagement with antibiotic messaging in secondary care: a qualitative feasibility study of the ‘review and revise’ experience

by Fiona Mowbray, Katy Sivyer, Marta Santillo, Nicola Jones, Tim E. A. Peto, A. Sarah Walker, Martin J. Llewelyn, Lucy Yardley
Published 2020-04-01

Detection of mixed infection from bacterial whole genome sequence data allows assessment of its role in Clostridium difficile transmission.

by David W Eyre, Madeleine L Cule, David Griffiths, Derrick W Crook, Tim E A Peto, A Sarah Walker, Daniel J Wilson
Published 2013-01-01

Human and Porcine Transmission of Clostridioides difficile Ribotype 078, Europe

by Geraldine Moloney, David W. Eyre, Micheál Mac Aogáin, Máire C. McElroy, Alison Vaughan, Tim E.A. Peto, Derrick W. Crook, Thomas R. Rogers
Published 2021-09-01

Asymptomatic Clostridium difficile colonisation and onward transmission.

by David W Eyre, David Griffiths, Alison Vaughan, Tanya Golubchik, Milind Acharya, Lily O'Connor, Derrick W Crook, A Sarah Walker, Tim E A Peto
Published 2013-01-01

A Quantitative Evaluation of MIRU-VNTR Typing Against Whole-Genome Sequencing for Identifying Mycobacterium tuberculosis Transmission: A Prospective Observational Cohort Study

by David H. Wyllie, Jennifer A. Davidson, E. Grace Smith, Priti Rathod, Derrick W. Crook, Tim E.A. Peto, Esther Robinson, Tim Walker, Colin Campbell
Published 2018-08-01

Surveillance of infection severity: a registry study of laboratory diagnosed Clostridium difficile.

by Iryna Schlackow, A Sarah Walker, Kate Dingle, David Griffiths, Sarah Oakley, John Finney, Ali Vaughan, Martin J Gill, Derrick W Crook, Tim E A Peto, David H Wyllie
Published 2012-01-01

Clostridium difficile trehalose metabolism variants are common and not associated with adverse patient outcomes when variably present in the same lineageResearch in context

by David W. Eyre, Xavier Didelot, Anthony M. Buckley, Jane Freeman, Ines B. Moura, Derrick W. Crook, Tim E.A. Peto, A. Sarah Walker, Mark H. Wilcox, Kate E. Dingle
Published 2019-05-01

Using hospital network-based surveillance for antimicrobial resistance as a more robust alternative to self-reporting.

by Tjibbe Donker, Timo Smieszek, Katherine L Henderson, Timothy M Walker, Russell Hope, Alan P Johnson, Neil Woodford, Derrick W Crook, Tim E A Peto, A Sarah Walker, Julie V Robotham
Published 2019-01-01

Short-term genome stability of serial Clostridium difficile ribotype 027 isolates in an experimental gut model and recurrent human disease.

by David W Eyre, A Sarah Walker, Jane Freeman, Simon D Baines, Warren N Fawley, Caroline H Chilton, David Griffiths, Alison Vaughan, Derrick W Crook, Tim E A Peto, Mark H Wilcox
Published 2013-01-01

The relative importance of large problems far away versus small problems closer to home: insights into limiting the spread of antimicrobial resistance in England

by Tjibbe Donker, Katherine L. Henderson, Katie L. Hopkins, Andrew R. Dodgson, Stephanie Thomas, Derrick W. Crook, Tim E. A. Peto, Alan P. Johnson, Neil Woodford, A. Sarah Walker, Julie V. Robotham
Published 2017-04-01

Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices

by Nicholas D Sanderson, Teresa L Street, Dona Foster, Jeremy Swann, Bridget L Atkins, Andrew J Brent, Martin A McNally, Sarah Oakley, Adrian Taylor, Tim E A Peto, Derrick W Crook, David W Eyre
Published 2018-09-01

Characterisation of Clostridium difficile hospital ward-based transmission using extensive epidemiological data and molecular typing.

by A Sarah Walker, David W Eyre, David H Wyllie, Kate E Dingle, Rosalind M Harding, Lily O'Connor, David Griffiths, Ali Vaughan, John Finney, Mark H Wilcox, Derrick W Crook, Tim E A Peto
Published 2012-02-01

‘Caveat emptor’: the cautionary tale of endocarditis and the potential pitfalls of clinical coding data—an electronic health records study

by Nicola Fawcett, Bernadette Young, Leon Peto, T. Phuong Quan, Richard Gillott, Jianhua Wu, Chris Middlemass, Sheila Weston, Derrick W. Crook, Tim E. A. Peto, Berit Muller-Pebody, Alan P. Johnson, A. Sarah Walker, Jonathan A. T. Sandoe
Published 2019-09-01

Population-level faecal metagenomic profiling as a tool to predict antimicrobial resistance in Enterobacterales isolates causing invasive infections: An exploratory study across Ca...

by Olga Tosas Auguet, Rene Niehus, Hyun Soon Gweon, James A. Berkley, Joseph Waichungo, Tsi Njim, Jonathan D. Edgeworth, Rahul Batra, Kevin Chau, Jeremy Swann, Sarah A. Walker, Tim E.A. Peto, Derrick W. Crook, Sarah Lamble, Paul Turner, Ben S. Cooper, Nicole Stoesser
Published 2021-06-01

A modified RNA-Seq approach for whole genome sequencing of RNA viruses from faecal and blood samples.

by Elizabeth M Batty, T H Nicholas Wong, Amy Trebes, Karène Argoud, Moustafa Attar, David Buck, Camilla L C Ip, Tanya Golubchik, Madeleine Cule, Rory Bowden, Charis Manganis, Paul Klenerman, Eleanor Barnes, A Sarah Walker, David H Wyllie, Daniel J Wilson, Kate E Dingle, Tim E A Peto, Derrick W Crook, Paolo Piazza
Published 2013-01-01

The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples

by H. Soon Gweon, Liam P. Shaw, Jeremy Swann, Nicola De Maio, Manal AbuOun, Rene Niehus, Alasdair T. M. Hubbard, Mike J. Bowes, Mark J. Bailey, Tim E. A. Peto, Sarah J. Hoosdally, A. Sarah Walker, Robert P. Sebra, Derrick W. Crook, Muna F. Anjum, Daniel S. Read, Nicole Stoesser, on behalf of the REHAB consortium
Published 2019-10-01

Epidemiology of Clostridium difficile in infants in Oxfordshire, UK: Risk factors for colonization and carriage, and genetic overlap with regional C. difficile infection strains.

by Nicole Stoesser, David W Eyre, T Phuong Quan, Heather Godwin, Gemma Pill, Emily Mbuvi, Alison Vaughan, David Griffiths, Jessica Martin, Warren Fawley, Kate E Dingle, Sarah Oakley, Kazimierz Wanelik, John M Finney, Melina Kachrimanidou, Catrin E Moore, Sherwood Gorbach, Thomas V Riley, Derrick W Crook, Tim E A Peto, Mark H Wilcox, A Sarah Walker, Modernising Medical Microbiology Informatics Group (MMMIG)
Published 2017-01-01