Integration of clinical and gene expression data has a synergetic effect on predicting breast cancer outcome.

by Martin H van Vliet, Hugo M Horlings, Marc J van de Vijver, Marcel J T Reinders, Lodewyk F A Wessels
Published 2012-01-01

Gene expression programs of human smooth muscle cells: tissue-specific differentiation and prognostic significance in breast cancers.

by Jen-Tsan Chi, Edwin H Rodriguez, Zhen Wang, Dimitry S A Nuyten, Sayan Mukherjee, Matt van de Rijn, Marc J van de Vijver, Trevor Hastie, Patrick O Brown
Published 2007-09-01

External validation of Adjuvant! Online breast cancer prognosis tool. Prioritising recommendations for improvement.

by David Hajage, Yann de Rycke, Marc Bollet, Alexia Savignoni, Martial Caly, Jean-Yves Pierga, Hugo M Horlings, Marc J Van de Vijver, Anne Vincent-Salomon, Brigitte Sigal-Zafrani, Claire Senechal, Bernard Asselain, Xavier Sastre, Fabien Reyal
Published 2011-01-01

Prospective validation of craniocaudal tumour size on MR imaging compared to histoPAthology in patients with uterine cervical cancer: The MPAC study

by Peter de Boer, Anje M. Spijkerboer, Maaike C.G. Bleeker, Luc R.C.W. van Lonkhuijzen, Mélanie A. Monraats, Aart J. Nederveen, Marc J. van de Vijver, Gemma G. Kenter, Arjan Bel, Coen R.N. Rasch, Jaap Stoker, Lukas J.A. Stalpers
Published 2019-09-01

Gene expression programs in response to hypoxia: cell type specificity and prognostic significance in human cancers.

by Jen-Tsan Chi, Zhen Wang, Dimitry S A Nuyten, Edwin H Rodriguez, Marci E Schaner, Ali Salim, Yun Wang, Gunnar B Kristensen, Aslaug Helland, Anne-Lise Børresen-Dale, Amato Giaccia, Michael T Longaker, Trevor Hastie, George P Yang, Marc J van de Vijver, Patrick O Brown
Published 2006-03-01

Pathological validation and prognostic potential of quantitative MRI in the characterization of pancreas cancer: preliminary experience

by Remy Klaassen, Anne Steins, Oliver J. Gurney‐Champion, Maarten F. Bijlsma, Geertjan vanTienhoven, Marc R. W. Engelbrecht, Casper H. J. vanEijck, Mustafa Suker, Johanna W. Wilmink, Marc G. Besselink, Olivier R. Busch, Onno J. deBoer, Marc J. van deVijver, Gerrit K. J. Hooijer, Joanne Verheij, Jaap Stoker, Aart J. Nederveen, Hanneke W. M. vanLaarhoven
Published 2020-09-01

Comprehensive evaluation of methods to assess overall and cell-specific immune infiltrates in breast cancer

by Iris Nederlof, Davide De Bortoli, Yacine Bareche, Bastien Nguyen, Michiel de Maaker, Gerrit K. J. Hooijer, Laurence Buisseret, Marleen Kok, Marcel Smid, Gert G. G. M. Van den Eynden, Arie B. Brinkman, Jan Hudecek, Jan Koster, Christos Sotiriou, Denis Larsimont, John W. M. Martens, Marc J. van de Vijver, Hugo M. Horlings, Roberto Salgado, Elia Biganzoli, Christine Desmedt
Published 2019-12-01

Assessment of PD-L1 expression across breast cancer molecular subtypes, in relation to mutation rate, BRCA1-like status, tumor-infiltrating immune cells and survival

by Marcelo Sobral-Leite, Koen Van de Vijver, Magali Michaut, Rianne van der Linden, Gerrit K.J. Hooijer, Hugo M. Horlings, Tesa M. Severson, Anna Marie Mulligan, Nayana Weerasooriya, Joyce Sanders, Annuska M Glas, Diederik Wehkamp, Lorenza Mittempergher, Kelly Kersten, Ashley Cimino-Mathews, Dennis Peters, Erik Hooijberg, Annegien Broeks, Marc J. van de Vijver, Rene Bernards, Irene L. Andrulis, Marleen Kok, Karin E. de Visser, Marjanka K. Schmidt
Published 2018-12-01

Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation

by Arie B. Brinkman, Serena Nik-Zainal, Femke Simmer, F. Germán Rodríguez-González, Marcel Smid, Ludmil B. Alexandrov, Adam Butler, Sancha Martin, Helen Davies, Dominik Glodzik, Xueqing Zou, Manasa Ramakrishna, Johan Staaf, Markus Ringnér, Anieta Sieuwerts, Anthony Ferrari, Sandro Morganella, Thomas Fleischer, Vessela Kristensen, Marta Gut, Marc J. van de Vijver, Anne-Lise Børresen-Dale, Andrea L. Richardson, Gilles Thomas, Ivo G. Gut, John W. M. Martens, John A. Foekens, Michael R. Stratton, Hendrik G. Stunnenberg
Published 2019-04-01

The topography of mutational processes in breast cancer genomes

by Sandro Morganella, Ludmil B. Alexandrov, Dominik Glodzik, Xueqing Zou, Helen Davies, Johan Staaf, Anieta M. Sieuwerts, Arie B. Brinkman, Sancha Martin, Manasa Ramakrishna, Adam Butler, Hyung-Yong Kim, Åke Borg, Christos Sotiriou, P. Andrew Futreal, Peter J. Campbell, Paul N. Span, Steven Van Laere, Sunil R. Lakhani, Jorunn E. Eyfjord, Alastair M. Thompson, Hendrik G. Stunnenberg, Marc J. van de Vijver, John W. M. Martens, Anne-Lise Børresen-Dale, Andrea L. Richardson, Gu Kong, Gilles Thomas, Julian Sale, Cristina Rada, Michael R. Stratton, Ewan Birney, Serena Nik-Zainal
Published 2016-05-01

Breast cancer genome and transcriptome integration implicates specific mutational signatures with immune cell infiltration

by Marcel Smid, F. Germán Rodríguez-González, Anieta M. Sieuwerts, Roberto Salgado, Wendy J. C. Prager-Van der Smissen, Michelle van der Vlugt-Daane, Anne van Galen, Serena Nik-Zainal, Johan Staaf, Arie B. Brinkman, Marc J. van de Vijver, Andrea L. Richardson, Aquila Fatima, Kim Berentsen, Adam Butler, Sancha Martin, Helen R. Davies, Reno Debets, Marion E. Meijer-Van Gelder, Carolien H. M. van Deurzen, Gaëtan MacGrogan, Gert G. G. M. Van den Eynden, Colin Purdie, Alastair M. Thompson, Carlos Caldas, Paul N. Span, Peter T. Simpson, Sunil R. Lakhani, Steven Van Laere, Christine Desmedt, Markus Ringnér, Stefania Tommasi, Jorunn Eyford, Annegien Broeks, Anne Vincent-Salomon, P. Andrew Futreal, Stian Knappskog, Tari King, Gilles Thomas, Alain Viari, Anita Langerød, Anne-Lise Børresen-Dale, Ewan Birney, Hendrik G. Stunnenberg, Mike Stratton, John A. Foekens, John W. M. Martens
Published 2016-09-01