The Human Gut Antibiotic Resistome in the Metagenomic Era: Progress and Perspectives

by Yongfei Hu, Baoli Zhu
Published 2016-04-01

Combining metagenomics and metatranscriptomics to study human, animal and environmental resistomes

by Yanan Wang, Yongfei Hu, George Fu Gao
Published 2020-03-01

PARMAP: A Pan-Genome-Based Computational Framework for Predicting Antimicrobial Resistance

by Xuefei Li, Jingxia Lin, Yongfei Hu, Jiajian Zhou
Published 2020-10-01

Distinct Responses of Mycobacterium smegmatis to Exposure to Low and High Levels of Hydrogen Peroxide.

by Xiaojing Li, Jun Wu, Jiao Han, Yongfei Hu, Kaixia Mi
Published 2015-01-01

The association between microbial community and ileal gene expression on intestinal wall thickness alterations in chickens

by Dazhi Tang, Zhui Li, Tahir Mahmood, Dan Liu, Yongfei Hu, Yuming Guo
Published 2020-04-01

In vivo evolution of drug-resistant Mycobacterium tuberculosis in patients during long-term treatment

by Yuhui Xu, Fei Liu, Suting Chen, Jiannan Wu, Yongfei Hu, Baoli Zhu, Zhaogang Sun
Published 2018-08-01

The Gut Microbiome Signatures Discriminate Healthy From Pulmonary Tuberculosis Patients

by Yongfei Hu, Yongfei Hu, Yuqing Feng, Jiannan Wu, Fei Liu, Zhiguo Zhang, Yanan Hao, Shihao Liang, Boxing Li, Jing Li, Na Lv, Yuhui Xu, Baoli Zhu, Baoli Zhu, Baoli Zhu, Zhaogang Sun
Published 2019-04-01

Pyrroloquinoline Quinone Alleviates Jejunal Mucosal Barrier Function Damage and Regulates Colonic Microbiota in Piglets Challenged With Enterotoxigenic Escherichia coli

by Caiyun Huang, Dongxu Ming, Wenhui Wang, Zijie Wang, Yongfei Hu, Xi Ma, Xi Ma, Fenglai Wang
Published 2020-07-01

Genomic Characterization of Salmonella enterica Isolates From Retail Meat in Beijing, China

by Na Lyu, Yuqing Feng, Yuanlong Pan, Hua Huang, Yan Liu, Chenyu Xue, Baoli Zhu, Yongfei Hu
Published 2021-04-01

Integrated metagenomic and metatranscriptomic profiling reveals differentially expressed resistomes in human, chicken, and pig gut microbiomes

by Yanan Wang, Yongfei Hu, Fei Liu, Jian Cao, Na Lv, Baoli Zhu, Gaiping Zhang, George Fu Gao
Published 2020-05-01

Tag-seq: a convenient and scalable method for genome-wide specificity assessment of CRISPR/Cas nucleases

by Hongxin Huang, Yongfei Hu, Guanjie Huang, Shufeng Ma, Jianqi Feng, Dong Wang, Ying Lin, Jiajian Zhou, Zhili Rong
Published 2021-07-01

Metagenomic analysis reveals the microbiome and resistome in migratory birds

by Jian Cao, Yongfei Hu, Fei Liu, Yanan Wang, Yuhai Bi, Na Lv, Jing Li, Baoli Zhu, George F. Gao
Published 2020-03-01

Structural diversity of class 1 integrons and their associated gene cassettes in Klebsiella pneumoniae isolates from a hospital in China.

by Bin Li, Yongfei Hu, Qi Wang, Yong Yi, Patrick C Y Woo, Hua Jing, Baoli Zhu, Cui Hua Liu
Published 2013-01-01

Single-cell transcriptome analysis reveals the dynamics of human immune cells during early fetal skin development

by Yingping Xu, Jun Zhang, Yongfei Hu, Xuefei Li, Lihua Sun, Yu Peng, Yuzhe Sun, Bing Liu, Zhilei Bian, Zhili Rong
Published 2021-08-01

Inulin Can Alleviate Metabolism Disorders in ob/ob Mice by Partially Restoring Leptin-related Pathways Mediated by Gut Microbiota

by Xiaofeng Song, Liang Zhong, Na Lyu, Fei Liu, Boxing Li, Yanan Hao, Yong Xue, Jing Li, Yuqing Feng, Yue Ma, Yongfei Hu, Baoli Zhu
Published 2019-02-01

Epidemiologic and genomic insights on mcr-1-harbouring Salmonella from diarrhoeal outpatients in Shanghai, China, 2006–2016Research in context

by Xin Lu, Mei Zeng, Jialiang Xu, Haijian Zhou, Baoke Gu, Zhenpeng Li, Huiming Jin, Xiaoxun Wang, Wen Zhang, Yongfei Hu, Wenjia Xiao, Baoli Zhu, Xuebin Xu, Biao Kan
Published 2019-04-01

Dissemination and Mechanism for the MCR-1 Colistin Resistance.

by Rongsui Gao, Yongfei Hu, Zhencui Li, Jian Sun, Qingjing Wang, Jingxia Lin, Huiyan Ye, Fei Liu, Swaminath Srinivas, Defeng Li, Baoli Zhu, Ya-Hong Liu, Guo-Bao Tian, Youjun Feng
Published 2016-11-01

More diversified antibiotic resistance genes in chickens and workers of the live poultry markets

by Yanan Wang, Na Lyu, Fei Liu, William J. Liu, Yuhai Bi, Zewu Zhang, Sufang Ma, Jian Cao, Xiaofeng Song, Aiping Wang, Gaiping Zhang, Yongfei Hu, Baoli Zhu, George Fu Gao
Published 2021-08-01

Clinical, immunological and bacteriological characteristics of H7N9 patients nosocomially co-infected by Acinetobacter Baumannii: a case control study

by William J. Liu, Rongrong Zou, Yongfei Hu, Min Zhao, Chuansong Quan, Shuguang Tan, Kai Luo, Jing Yuan, Haixia Zheng, Jue Liu, Min Liu, Yuhai Bi, Jinghua Yan, Baoli Zhu, Dayan Wang, Guizhen Wu, Lei Liu, Kwok-Yung Yuen, George F. Gao, Yingxia Liu
Published 2018-12-01

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.

by Florent E Angly, Dana Willner, Alejandra Prieto-Davó, Robert A Edwards, Robert Schmieder, Rebecca Vega-Thurber, Dionysios A Antonopoulos, Katie Barott, Matthew T Cottrell, Christelle Desnues, Elizabeth A Dinsdale, Mike Furlan, Matthew Haynes, Matthew R Henn, Yongfei Hu, David L Kirchman, Tracey McDole, John D McPherson, Folker Meyer, R Michael Miller, Egbert Mundt, Robert K Naviaux, Beltran Rodriguez-Mueller, Rick Stevens, Linda Wegley, Lixin Zhang, Baoli Zhu, Forest Rohwer
Published 2009-12-01