Transplanting a Microbial Organ: the Good, the Bad, and the Unknown

by Dionysios A. Antonopoulos, Eugene B. Chang
Published 2016-05-01

Metagenomic profiling of a microbial assemblage associated with the California mussel: a node in networks of carbon and nitrogen cycling.

by Catherine A Pfister, Folker Meyer, Dionysios A Antonopoulos
Published 2010-05-01

Parallelized, Aerobic, Single Carbon-Source Enrichments from Different Natural Environments Contain Divergent Microbial Communities

by Theodore M. Flynn, Jason C. Koval, Stephanie M. Greenwald, Sarah M. Owens, Kenneth M. Kemner, Dionysios A. Antonopoulos
Published 2017-11-01

Regional mucosa-associated microbiota determine physiological expression of TLR2 and TLR4 in murine colon.

by Yunwei Wang, Suzanne Devkota, Mark W Musch, Bana Jabri, Cathryn Nagler, Dionysios A Antonopoulos, Alexander Chervonsky, Eugene B Chang
Published 2010-10-01

Polymorphic Immune Mechanisms Regulate Commensal Repertoire

by Aly A. Khan, Leonid Yurkovetskiy, Kelly O’Grady, Joseph M. Pickard, Renée de Pooter, Dionysios A. Antonopoulos, Tatyana Golovkina, Alexander Chervonsky
Published 2019-10-01

Reduction of Sb(V) by coupled biotic-abiotic processes under sulfidogenic conditions

by Clayton R. Johnson, Dionysios A. Antonopoulos, Maxim I. Boyanov, Theodore M. Flynn, Jason C. Koval, Kenneth M. Kemner, Edward J. O'Loughlin
Published 2021-02-01

Impact of Organic Carbon Electron Donors on Microbial Community Development under Iron- and Sulfate-Reducing Conditions.

by Man Jae Kwon, Edward J O'Loughlin, Maxim I Boyanov, Jennifer M Brulc, Eric R Johnston, Kenneth M Kemner, Dionysios A Antonopoulos
Published 2016-01-01

Biogeochemical dynamics and microbial community development under sulfate- and iron-reducing conditions based on electron shuttle amendment.

by Theodore M Flynn, Dionysios A Antonopoulos, Kelly A Skinner, Jennifer M Brulc, Eric Johnston, Maxim I Boyanov, Man Jae Kwon, Kenneth M Kemner, Edward J O'Loughlin
Published 2021-01-01

Tracking microbial colonization in fecal microbiota transplantation experiments via genome-resolved metagenomics

by Sonny T. M. Lee, Stacy A. Kahn, Tom O. Delmont, Alon Shaiber, Özcan C. Esen, Nathaniel A. Hubert, Hilary G. Morrison, Dionysios A. Antonopoulos, David T. Rubin, A. Murat Eren
Published 2017-05-01

Patient-Specific Bacteroides Genome Variants in Pouchitis

by Joseph H. Vineis, Daina L. Ringus, Hilary G. Morrison, Tom O. Delmont, Sushila Dalal, Laura H. Raffals, Dionysios A. Antonopoulos, David T. Rubin, A. Murat Eren, Eugene B. Chang, Mitchell L. Sogin
Published 2016-11-01

Exercise prevents weight gain and alters the gut microbiota in a mouse model of high fat diet-induced obesity.

by Christian C Evans, Kathy J LePard, Jeff W Kwak, Mary C Stancukas, Samantha Laskowski, Joseph Dougherty, Laura Moulton, Adam Glawe, Yunwei Wang, Vanessa Leone, Dionysios A Antonopoulos, Dan Smith, Eugene B Chang, Mae J Ciancio
Published 2014-01-01

Diversity and strain specificity of plant cell wall degrading enzymes revealed by the draft genome of Ruminococcus flavefaciens FD-1.

by Margret E Berg Miller, Dionysios A Antonopoulos, Marco T Rincon, Mark Band, Albert Bari, Tatsiana Akraiko, Alvaro Hernandez, Jyothi Thimmapuram, Bernard Henrissat, Pedro M Coutinho, Ilya Borovok, Sadanari Jindou, Raphael Lamed, Harry J Flint, Edward A Bayer, Bryan A White
Published 2009-08-01

Fecal microbiota transplant rescues mice from human pathogen mediated sepsis by restoring systemic immunity

by Sangman M. Kim, Jennifer R. DeFazio, Sanjiv K. Hyoju, Kishan Sangani, Robert Keskey, Monika A. Krezalek, Nikolai N. Khodarev, Naseer Sangwan, Scott Christley, Katharine G. Harris, Ankit Malik, Alexander Zaborin, Romain Bouziat, Diana R. Ranoa, Mara Wiegerinck, Jordan D. Ernest, Baddr A. Shakhsheer, Irma D. Fleming, Ralph R. Weichselbaum, Dionysios A. Antonopoulos, Jack A. Gilbert, Luis B. Barreiro, Olga Zaborina, Bana Jabri, John C. Alverdy
Published 2020-05-01

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.

by Florent E Angly, Dana Willner, Alejandra Prieto-Davó, Robert A Edwards, Robert Schmieder, Rebecca Vega-Thurber, Dionysios A Antonopoulos, Katie Barott, Matthew T Cottrell, Christelle Desnues, Elizabeth A Dinsdale, Mike Furlan, Matthew Haynes, Matthew R Henn, Yongfei Hu, David L Kirchman, Tracey McDole, John D McPherson, Folker Meyer, R Michael Miller, Egbert Mundt, Robert K Naviaux, Beltran Rodriguez-Mueller, Rick Stevens, Linda Wegley, Lixin Zhang, Baoli Zhu, Forest Rohwer
Published 2009-12-01