Comprehensive evaluation and characterisation of short read general-purpose structural variant calling software

by Daniel L. Cameron, Leon Di Stefano, Anthony T. Papenfuss
Published 2019-07-01

CLOVE: classification of genomic fusions into structural variation events

by Jan Schröder, Adrianto Wirawan, Bertil Schmidt, Anthony T. Papenfuss
Published 2017-07-01

Improving the Power of Structural Variation Detection by Augmenting the Reference.

by Jan Schröder, Santhosh Girirajan, Anthony T Papenfuss, Paul Medvedev
Published 2015-01-01

Somatic mutations in early metazoan genes disrupt regulatory links between unicellular and multicellular genes in cancer

by Anna S Trigos, Richard B Pearson, Anthony T Papenfuss, David L Goode
Published 2019-02-01

PD-L1 is not constitutively expressed on Tasmanian devil facial tumor cells but is strongly upregulated in response to IFN-γ and can be expressed in the tumor microenvironment

by Andrew Steven Flies, Andrew Steven Flies, Alan Bruce Lyons, Lynn M Corcoran, Anthony T Papenfuss, Anthony T Papenfuss, Anthony T Papenfuss, James M Murphy, Graeme W Knowles, Greg M Woods, Greg M Woods, John Dominic Hayball, John Dominic Hayball
Published 2016-12-01

tidybulk: an R tidy framework for modular transcriptomic data analysis

by Stefano Mangiola, Ramyar Molania, Ruining Dong, Maria A. Doyle, Anthony T. Papenfuss
Published 2021-01-01

The identification of immune genes in the milk transcriptome of the Tasmanian devil (Sarcophilus harrisii)

by Rehana V. Hewavisenti, Katrina M. Morris, Denis O’Meally, Yuanyuan Cheng, Anthony T. Papenfuss, Katherine Belov
Published 2016-01-01

Mitochondrial Genome Sequence of the Scabies Mite Provides Insight into the Genetic Diversity of Individual Scabies Infections.

by Ehtesham Mofiz, Torsten Seemann, Melanie Bahlo, Deborah Holt, Bart J Currie, Katja Fischer, Anthony T Papenfuss
Published 2016-02-01

Phylogenetic relationships, stage-specific expression and localisation of a unique family of inactive cysteine proteases in Sarcoptes scabiei

by Deepani D. Fernando, Simone L. Reynolds, Martha Zakrzewski, Ehtesham Mofiz, Anthony T. Papenfuss, Deborah Holt, Katja Fischer
Published 2018-05-01

The Scalloped and Nerfin-1 Transcription Factors Cooperate to Maintain Neuronal Cell Fate

by Joseph H.A. Vissers, Francesca Froldi, Jan Schröder, Anthony T. Papenfuss, Louise Y. Cheng, Kieran F. Harvey
Published 2018-11-01

Diversity of conotoxin gene superfamilies in the venomous snail, Conus victoriae.

by Samuel D Robinson, Helena Safavi-Hemami, Lachlan D McIntosh, Anthony W Purcell, Raymond S Norton, Anthony T Papenfuss
Published 2014-01-01

A statistical framework for analyzing deep mutational scanning data

by Alan F. Rubin, Hannah Gelman, Nathan Lucas, Sandra M. Bajjalieh, Anthony T. Papenfuss, Terence P. Speed, Douglas M. Fowler
Published 2017-08-01

Correction to: A statistical framework for analyzing deep mutational scanning data

by Alan F. Rubin, Hannah Gelman, Nathan Lucas, Sandra M. Bajjalieh, Anthony T. Papenfuss, Terence P. Speed, Douglas M. Fowler
Published 2018-02-01

Telomere dynamics and homeostasis in a transmissible cancer.

by Beata Ujvari, Anne-Maree Pearse, Robyn Taylor, Stephen Pyecroft, Cassandra Flanagan, Sara Gombert, Anthony T Papenfuss, Thomas Madsen, Katherine Belov
Published 2012-01-01

Canary: an atomic pipeline for clinical amplicon assays

by Kenneth D. Doig, Jason Ellul, Andrew Fellowes, Ella R. Thompson, Georgina Ryland, Piers Blombery, Anthony T. Papenfuss, Stephen B. Fox
Published 2017-12-01

MaveDB: an open-source platform to distribute and interpret data from multiplexed assays of variant effect

by Daniel Esposito, Jochen Weile, Jay Shendure, Lea M. Starita, Anthony T. Papenfuss, Frederick P. Roth, Douglas M. Fowler, Alan F. Rubin
Published 2019-11-01

T-Cell Receptor Therapy in the Treatment of Ovarian Cancer: A Mini Review

by Jessica W. Y. Wu, Sudiksha Dand, Lachlan Doig, Anthony T. Papenfuss, Clare L. Scott, Gwo Ho, Gwo Ho, Joshua D. Ooi
Published 2021-04-01

First Description of the Composition and the Functional Capabilities of the Skin Microbial Community Accompanying Severe Scabies Infestation in Humans

by Charlotte Bernigaud, Martha Zakrzewski, Sara Taylor, Pearl M. Swe, Anthony T. Papenfuss, Kadaba S. Sriprakash, Deborah Holt, Olivier Chosidow, Bart J. Currie, Katja Fischer
Published 2021-04-01

Detection of cell-free microbial DNA using a contaminant-controlled analysis framework

by Enrique Zozaya-Valdés, Stephen Q. Wong, Jeanette Raleigh, Athena Hatzimihalis, Sarah Ftouni, Anthony T. Papenfuss, Shahneen Sandhu, Mark A. Dawson, Sarah-Jane Dawson
Published 2021-06-01

Expression of a Chimeric Antigen Receptor in Multiple Leukocyte Lineages in Transgenic Mice.

by Carmen S M Yong, Jennifer A Westwood, Jan Schröder, Anthony T Papenfuss, Bianca von Scheidt, Maria Moeller, Christel Devaud, Phillip K Darcy, Michael H Kershaw
Published 2015-01-01