OHMM: a Hidden Markov Model accurately predicting the occupancy of a transcription factor with a self-overlapping binding motif

<p>Abstract</p> <p>Background</p> <p>DNA sequence binding motifs for several important transcription factors happen to be self-overlapping. Many of the current regulatory site identification methods do not explicitly take into account the overlapping sites. Moreover, mo...

Full description

Bibliographic Details
Main Authors: Nagaraj Vijayalakshmi H, Gupta Nupur, Drawid Amar, Gélinas Céline, Sengupta Anirvan M
Format: Article
Language:English
Published: BMC 2009-07-01
Series:BMC Bioinformatics
Online Access:http://www.biomedcentral.com/1471-2105/10/208