SOPRA: Scaffolding algorithm for paired reads via statistical optimization

by Michael Todd P, Dayarian Adel, Sengupta Anirvan M
Published 2010-06-01

Better estimation of protein-DNA interaction parameters improve prediction of functional sites

by O'Flanagan Ruadhan A, Nagaraj Vijayalakshmi H, Sengupta Anirvan M
Published 2008-12-01

OHMM: a Hidden Markov Model accurately predicting the occupancy of a transcription factor with a self-overlapping binding motif

by Nagaraj Vijayalakshmi H, Gupta Nupur, Drawid Amar, Gélinas Céline, Sengupta Anirvan M
Published 2009-07-01

Combined analysis of expression data and transcription factor binding sites in the yeast genome

by Mathias Jonathan R, Bruning Adrian R, O'Flanagan Ruadhan A, Nagaraj Vijayalakshmi H, Vershon Andrew K, Sengupta Anirvan M
Published 2004-08-01