Performance of genotype imputation for low frequency and rare variants from the 1000 genomes.

Genotype imputation is now routinely applied in genome-wide association studies (GWAS) and meta-analyses. However, most of the imputations have been run using HapMap samples as reference, imputation of low frequency and rare variants (minor allele frequency (MAF) < 5%) are not systemically assess...

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Bibliographic Details
Main Authors: Hou-Feng Zheng, Jing-Jing Rong, Ming Liu, Fang Han, Xing-Wei Zhang, J Brent Richards, Li Wang
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2015-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC4306552?pdf=render