ERASE-Seq: Leveraging replicate measurements to enhance ultralow frequency variant detection in NGS data.

by Nick Kamps-Hughes, Andrew McUsic, Laurie Kurihara, Timothy T Harkins, Prithwish Pal, Claire Ray, Cristian Ionescu-Zanetti
Published 2018-01-01

Correction: Exome Sequencing of a Multigenerational Human Pedigree

by Dale J. Hedges, Dan Burges, Eric Powell, Cherylyn Almonte, Jia Huang, Stuart Young, Benjamin Boese, Mike Schmidt, Margaret A. Pericak-Vance, Eden Martin, Xinmin Zhang, Timothy T. Harkins, Stephan Züchner
Published 2009-01-01

Large-Scale Discovery of Gene-Enriched SNPs

by Michael A. Gore, Mark H. Wright, Elhan S. Ersoz, Pascal Bouffard, Edward S. Szekeres, Thomas P. Jarvie, Bonnie L. Hurwitz, Apurva Narechania, Timothy T. Harkins, George S. Grills, Doreen H. Ware, Edward S. Buckler
Published 2009-07-01

Exome sequencing of a multigenerational human pedigree.

by Dale J Hedges, Dan Burges, Eric Powell, Cherylyn Almonte, Jia Huang, Stuart Young, Benjamin Boese, Mike Schmidt, Margaret A Pericak-Vance, Eden Martin, Xinmin Zhang, Timothy T Harkins, Stephan Züchner
Published 2009-12-01

Correction: Exome Sequencing of a Multigenerational Human Pedigree.

by Dale J. Hedges, Dan Burges, Eric Powell, Cherylyn Almonte, Jia Huang, Stuart Young, Benjamin Boese, Mike Schmidt, Margaret A. Pericak-Vance, Eden Martin, Xinmin Zhang, Timothy T. Harkins, Stephan Züchner
Published 2009-01-01

Sequencing of seven haloarchaeal genomes reveals patterns of genomic flux.

by Erin A Lynch, Morgan G I Langille, Aaron Darling, Elizabeth G Wilbanks, Caitlin Haltiner, Katie S Y Shao, Michael O Starr, Clotilde Teiling, Timothy T Harkins, Robert A Edwards, Jonathan A Eisen, Marc T Facciotti
Published 2012-01-01

Next-generation sequencing of human mitochondrial reference genomes uncovers high heteroplasmy frequency.

by Maria Ximena Sosa, I K Ashok Sivakumar, Samantha Maragh, Vamsi Veeramachaneni, Ramesh Hariharan, Minothi Parulekar, Karin M Fredrikson, Timothy T Harkins, Jeffrey Lin, Andrew B Feldman, Pramila Tata, Georg B Ehret, Aravinda Chakravarti
Published 2012-01-01

Genomic Analysis of Uterine Lavage Fluid Detects Early Endometrial Cancers and Reveals a Prevalent Landscape of Driver Mutations in Women without Histopathologic Evidence of Cancer...

by Navya Nair, Olga Camacho-Vanegas, Dmitry Rykunov, Matthew Dashkoff, Sandra Catalina Camacho, Cassie A Schumacher, Jonathan C Irish, Timothy T Harkins, Elijah Freeman, Isaac Garcia, Elena Pereira, Sviatoslav Kendall, Rachel Belfer, Tamara Kalir, Robert Sebra, Boris Reva, Peter Dottino, John A Martignetti
Published 2016-12-01

Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections.

by Stephen J Salipante, Dhruba J Sengupta, Christopher Rosenthal, Gina Costa, Jessica Spangler, Elizabeth H Sims, Michael A Jacobs, Samuel I Miller, Daniel R Hoogestraat, Brad T Cookson, Connor McCoy, Frederick A Matsen, Jay Shendure, Clarence C Lee, Timothy T Harkins, Noah G Hoffman
Published 2013-01-01

An insect herbivore microbiome with high plant biomass-degrading capacity.

by Garret Suen, Jarrod J Scott, Frank O Aylward, Sandra M Adams, Susannah G Tringe, Adrián A Pinto-Tomás, Clifton E Foster, Markus Pauly, Paul J Weimer, Kerrie W Barry, Lynne A Goodwin, Pascal Bouffard, Lewyn Li, Jolene Osterberger, Timothy T Harkins, Steven C Slater, Timothy J Donohue, Cameron R Currie
Published 2010-09-01

Sequencing at sea: challenges and experiences in Ion Torrent PGM sequencing during the 2013 Southern Line Islands Research Expedition

by Yan Wei Lim, Daniel A. Cuevas, Genivaldo Gueiros Z. Silva, Kristen Aguinaldo, Elizabeth A. Dinsdale, Andreas F. Haas, Mark Hatay, Savannah E. Sanchez, Linda Wegley-Kelly, Bas E. Dutilh, Timothy T. Harkins, Clarence C. Lee, Warren Tom, Stuart A. Sandin, Jennifer E. Smith, Brian Zgliczynski, Mark J.A. Vermeij, Forest Rohwer, Robert A. Edwards
Published 2014-08-01

Population genomic analysis of ancient and modern genomes yields new insights into the genetic ancestry of the Tyrolean Iceman and the genetic structure of Europe.

by Martin Sikora, Meredith L Carpenter, Andres Moreno-Estrada, Brenna M Henn, Peter A Underhill, Federico Sánchez-Quinto, Ilenia Zara, Maristella Pitzalis, Carlo Sidore, Fabio Busonero, Andrea Maschio, Andrea Angius, Chris Jones, Javier Mendoza-Revilla, Georgi Nekhrizov, Diana Dimitrova, Nikola Theodossiev, Timothy T Harkins, Andreas Keller, Frank Maixner, Albert Zink, Goncalo Abecasis, Serena Sanna, Francesco Cucca, Carlos D Bustamante
Published 2014-05-01

Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs.

by Adam H Freedman, Rena M Schweizer, Diego Ortega-Del Vecchyo, Eunjung Han, Brian W Davis, Ilan Gronau, Pedro M Silva, Marco Galaverni, Zhenxin Fan, Peter Marx, Belen Lorente-Galdos, Oscar Ramirez, Farhad Hormozdiari, Can Alkan, Carles Vilà, Kevin Squire, Eli Geffen, Josip Kusak, Adam R Boyko, Heidi G Parker, Clarence Lee, Vasisht Tadigotla, Adam Siepel, Carlos D Bustamante, Timothy T Harkins, Stanley F Nelson, Tomas Marques-Bonet, Elaine A Ostrander, Robert K Wayne, John Novembre
Published 2016-03-01

Genome sequencing highlights the dynamic early history of dogs.

by Adam H Freedman, Ilan Gronau, Rena M Schweizer, Diego Ortega-Del Vecchyo, Eunjung Han, Pedro M Silva, Marco Galaverni, Zhenxin Fan, Peter Marx, Belen Lorente-Galdos, Holly Beale, Oscar Ramirez, Farhad Hormozdiari, Can Alkan, Carles Vilà, Kevin Squire, Eli Geffen, Josip Kusak, Adam R Boyko, Heidi G Parker, Clarence Lee, Vasisht Tadigotla, Alan Wilton, Adam Siepel, Carlos D Bustamante, Timothy T Harkins, Stanley F Nelson, Elaine A Ostrander, Elaine A Ostrander, Tomas Marques-Bonet, Robert K Wayne, John Novembre
Published 2014-01-01

The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle.

by Garret Suen, Clotilde Teiling, Lewyn Li, Carson Holt, Ehab Abouheif, Erich Bornberg-Bauer, Pascal Bouffard, Eric J Caldera, Elizabeth Cash, Amy Cavanaugh, Olgert Denas, Eran Elhaik, Marie-Julie Favé, Jürgen Gadau, Joshua D Gibson, Dan Graur, Kirk J Grubbs, Darren E Hagen, Timothy T Harkins, Martin Helmkampf, Hao Hu, Brian R Johnson, Jay Kim, Sarah E Marsh, Joseph A Moeller, Mónica C Muñoz-Torres, Marguerite C Murphy, Meredith C Naughton, Surabhi Nigam, Rick Overson, Rajendhran Rajakumar, Justin T Reese, Jarrod J Scott, Chris R Smith, Shu Tao, Neil D Tsutsui, Lumi Viljakainen, Lothar Wissler, Mark D Yandell, Fabian Zimmer, James Taylor, Steven C Slater, Sandra W Clifton, Wesley C Warren, Christine G Elsik, Christopher D Smith, George M Weinstock, Nicole M Gerardo, Cameron R Currie
Published 2011-02-01