Omics Approaches to Identify Potential Biomarkers of Inflammatory Diseases in the Focal Adhesion Complex

by Johanne Brooks, Alastair Watson, Tamas Korcsmaros
Published 2017-04-01

What We Learned From Big Data for Autophagy Research

by Anne-Claire Jacomin, Lejla Gul, Padhmanand Sudhakar, Padhmanand Sudhakar, Tamas Korcsmaros, Tamas Korcsmaros, Ioannis P. Nezis
Published 2018-08-01

From bag-of-genes to bag-of-genomes: metabolic modelling of communities in the era of metagenome-assembled genomes

by Clémence Frioux, Dipali Singh, Tamas Korcsmaros, Falk Hildebrand
Published 2020-01-01

Linking proteins to signaling pathways for experiment design and evaluation.

by Illés J Farkas, Adám Szántó-Várnagy, Tamás Korcsmáros
Published 2012-01-01

Autophagy-dependent survival is controlled with a unique regulatory network upon various cellular stress events

by Orsolya Kapuy, Marianna Holczer, Margita Márton, Tamás Korcsmáros
Published 2021-03-01

Computational Biology and Machine Learning Approaches to Understand Mechanistic Microbiome-Host Interactions

by Padhmanand Sudhakar, Padhmanand Sudhakar, Padhmanand Sudhakar, Kathleen Machiels, Bram Verstockt, Bram Verstockt, Tamas Korcsmaros, Tamas Korcsmaros, Séverine Vermeire, Séverine Vermeire
Published 2021-05-01

MicrobioLink: An Integrated Computational Pipeline to Infer Functional Effects of Microbiome–Host Interactions

by Tahila Andrighetti, Balazs Bohar, Ney Lemke, Padhmanand Sudhakar, Tamas Korcsmaros
Published 2020-05-01

Systems-Level Feedbacks of NRF2 Controlling Autophagy upon Oxidative Stress Response

by Orsolya Kapuy, Diána Papp, Tibor Vellai, Gábor Bánhegyi, Tamás Korcsmáros
Published 2018-03-01

LC3-Associated Phagocytosis Is Required for Dendritic Cell Inflammatory Cytokine Response to Gut Commensal Yeast Saccharomyces cerevisiae

by Dimitra Lamprinaki, Gemma Beasy, Aleksandra Zhekova, Alexandra Wittmann, Steve James, Jo Dicks, Yoichiro Iwakura, Shinobu Saijo, Xiaomin Wang, Chung-Wai Chow, Ian Roberts, Tamas Korcsmaros, Tamas Korcsmaros, Tamas Korcsmaros, Ulrike Mayer, Thomas Wileman, Thomas Wileman, Norihito Kawasaki
Published 2017-10-01

On the role of bacterial metalloproteases in COVID-19 associated cytokine storm

by László Földvári-Nagy, Tamás Schnabel, Gabriella Dörnyei, Tamás Korcsmáros, Katalin Lenti
Published 2021-01-01

SARS-CoV-2 Causes a Different Cytokine Response Compared to Other Cytokine Storm-Causing Respiratory Viruses in Severely Ill Patients

by Marton Olbei, Marton Olbei, Isabelle Hautefort, Dezso Modos, Dezso Modos, Agatha Treveil, Agatha Treveil, Martina Poletti, Martina Poletti, Lejla Gul, Claire D. Shannon-Lowe, Tamas Korcsmaros, Tamas Korcsmaros
Published 2021-03-01

Staurosporine induces necroptotic cell death under caspase-compromised conditions in U937 cells.

by Zsuzsanna A Dunai, Gergely Imre, Gabor Barna, Tamas Korcsmaros, Istvan Petak, Pal I Bauer, Rudolf Mihalik
Published 2012-01-01

NRF2-ome: An Integrated Web Resource to Discover Protein Interaction and Regulatory Networks of NRF2

by Dénes Türei, Diána Papp, Dávid Fazekas, László Földvári-Nagy, Dezső Módos, Katalin Lenti, Péter Csermely, Tamás Korcsmáros
Published 2013-01-01

Bifidobacterium breve UCC2003 Induces a Distinct Global Transcriptomic Program in Neonatal Murine Intestinal Epithelial Cells

by Raymond Kiu, Agatha Treveil, Lukas C. Harnisch, Shabhonam Caim, Charlotte Leclaire, Douwe van Sinderen, Tamas Korcsmaros, Lindsay J. Hall
Published 2020-07-01

Signalogs: orthology-based identification of novel signaling pathway components in three metazoans.

by Tamás Korcsmáros, Máté S Szalay, Petra Rovó, Robin Palotai, Dávid Fazekas, Katalin Lenti, Illés J Farkas, Péter Csermely, Tibor Vellai
Published 2011-01-01

CytokineLink: A Cytokine Communication Map to Analyse Immune Responses—Case Studies in Inflammatory Bowel Disease and COVID-19

by Marton Olbei, John P. Thomas, Isabelle Hautefort, Agatha Treveil, Balazs Bohar, Matthew Madgwick, Lejla Gul, Luca Csabai, Dezso Modos, Tamas Korcsmaros
Published 2021-08-01

ViralLink: An integrated workflow to investigate the effect of SARS-CoV-2 on intracellular signalling and regulatory pathways.

by Agatha Treveil, Balazs Bohar, Padhmanand Sudhakar, Lejla Gul, Luca Csabai, Marton Olbei, Martina Poletti, Matthew Madgwick, Tahila Andrighetti, Isabelle Hautefort, Dezso Modos, Tamas Korcsmaros
Published 2021-02-01

Integrated intra‐ and intercellular signaling knowledge for multicellular omics analysis

by Dénes Türei, Alberto Valdeolivas, Lejla Gul, Nicolàs Palacio‐Escat, Michal Klein, Olga Ivanova, Márton Ölbei, Attila Gábor, Fabian Theis, Dezső Módos, Tamás Korcsmáros, Julio Saez‐Rodriguez
Published 2021-03-01

Neighbours of cancer-related proteins have key influence on pathogenesis and could increase the drug target space for anticancer therapies

by Dezső Módos, Krishna C. Bulusu, Dávid Fazekas, János Kubisch, Johanne Brooks, István Marczell, Péter M. Szabó, Tibor Vellai, Péter Csermely, Katalin Lenti, Andreas Bender, Tamás Korcsmáros
Published 2017-01-01

Evolution of regulatory networks associated with traits under selection in cichlids

by Tarang K. Mehta, Christopher Koch, Will Nash, Sara A. Knaack, Padhmanand Sudhakar, Marton Olbei, Sarah Bastkowski, Luca Penso-Dolfin, Tamas Korcsmaros, Wilfried Haerty, Sushmita Roy, Federica Di-Palma
Published 2021-01-01