Prolonged decay of molecular rate estimates for metazoan mitochondrial DNA

by Martyna Molak, Simon Y.W. Ho
Published 2015-03-01

The impact of modelling rate heterogeneity among sites on phylogenetic estimates of intraspecific evolutionary rates and timescales.

by Fangzhi Jia, Nathan Lo, Simon Y W Ho
Published 2014-01-01

A practical introduction to sequentially Markovian coalescent methods for estimating demographic history from genomic data

by Niklas Mather, Samuel M. Traves, Simon Y. W. Ho
Published 2020-01-01

The impacts of drift and selection on genomic evolution in insects

by K. Jun Tong, Sebastián Duchêne, Nathan Lo, Simon Y.W. Ho
Published 2017-04-01

Relaxed phylogenetics and dating with confidence.

by Alexei J Drummond, Simon Y W Ho, Matthew J Phillips, Andrew Rambaut
Published 2006-05-01

The effect of inappropriate calibration: three case studies in molecular ecology.

by Simon Y W Ho, Urmas Saarma, Ross Barnett, James Haile, Beth Shapiro
Published 2008-01-01

The evolutionary history of Stomatopoda (Crustacea: Malacostraca) inferred from molecular data

by Cara Van Der Wal, Shane T. Ahyong, Simon Y.W. Ho, Nathan Lo
Published 2017-09-01

A comparison of methods for estimating substitution rates from ancient DNA sequence data

by K. Jun Tong, David A. Duchêne, Sebastián Duchêne, Jemma L. Geoghegan, Simon Y. W. Ho
Published 2018-05-01

Tracing the epidemic history of HIV-1 CRF01_AE clusters using near-complete genome sequences

by Xingguang Li, Haizhou Liu, Lu Liu, Yi Feng, Marcia L. Kalish, Simon Y. W. Ho, Yiming Shao
Published 2017-06-01

Diversification and Demography of the Oriental Garden Lizard (Calotes versicolor) on Hainan Island and the Adjacent Mainland.

by Yong Huang, Xianguang Guo, Simon Y W Ho, Haitao Shi, Jiatang Li, Jun Li, Bo Cai, Yuezhao Wang
Published 2013-01-01

The global spread of hepatitis C virus 1a and 1b: a phylodynamic and phylogeographic analysis.

by Gkikas Magiorkinis, Emmanouil Magiorkinis, Dimitrios Paraskevis, Simon Y W Ho, Beth Shapiro, Oliver G Pybus, Jean-Pierre Allain, Angelos Hatzakis
Published 2009-12-01

Zebra Alphaherpesviruses (EHV-1 and EHV-9): Genetic Diversity, Latency and Co-Infections

by Azza Abdelgawad, Armando Damiani, Simon Y. W. Ho, Günter Strauss, Claudia A. Szentiks, Marion L. East, Nikolaus Osterrieder, Alex D. Greenwood
Published 2016-09-01

The temporal evolution and global spread of Cauliflower mosaic virus, a plant pararetrovirus.

by Ryosuke Yasaka, Huy D Nguyen, Simon Y W Ho, Sebastián Duchêne, Savas Korkmaz, Nikolaos Katis, Hideki Takahashi, Adrian J Gibbs, Kazusato Ohshima
Published 2014-01-01

The Timescale of Emergence and Spread of Turnip Mosaic Potyvirus

by Ryosuke Yasaka, Hirofumi Fukagawa, Mutsumi Ikematsu, Hiroko Soda, Savas Korkmaz, Alireza Golnaraghi, Nikolaos Katis, Simon Y. W. Ho, Adrian J. Gibbs, Kazusato Ohshima
Published 2017-06-01

Quantifying species diversity with a DNA barcoding-based method: Tibetan moth species (Noctuidae) on the Qinghai-Tibetan Plateau.

by Qian Jin, Huilin Han, XiMin Hu, XinHai Li, ChaoDong Zhu, Simon Y W Ho, Robert D Ward, Ai-bing Zhang
Published 2013-01-01

The mitochondrial genome of Elodia flavipalpis Aldrich (Diptera: Tachinidae) and the evolutionary timescale of Tachinid flies.

by Zhe Zhao, Tian-Juan Su, Douglas Chesters, Shi-di Wang, Simon Y W Ho, Chao-Dong Zhu, Xiao-Lin Chen, Chun-Tian Zhang
Published 2013-01-01

Global and Local Persistence of Influenza A(H5N1) Virus

by Xianbin Li, Zhong Zhang, Ailian Yu, Simon Y. W. Ho, Michael J. Carr, Weimin Zheng, Yanzhou Zhang, Chaodong Zhu, Fumin Lei, Weifeng Shi
Published 2014-08-01

Turnip mosaic potyvirus probably first spread to Eurasian brassica crops from wild orchids about 1000 years ago.

by Huy D Nguyen, Yasuhiro Tomitaka, Simon Y W Ho, Sebastián Duchêne, Heinrich-Josef Vetten, Dietrich Lesemann, John A Walsh, Adrian J Gibbs, Kazusato Ohshima
Published 2013-01-01

Mitogenomics of the Extinct Cave Lion, Panthera spelaea (Goldfuss, 1810), Resolve its Position within the Panthera Cats

by Ross Barnett, Marie Lisandra Zepeda Mendoza, André Elias Rodrigues Soares, Simon Y W Ho, Grant Zazula, Nobuyuki Yamaguchi, Beth Shapiro, Irina V Kirillova, Greger Larson, M Thomas P Gilbert
Published 2016-06-01

Using phylogenetics to explore interspecies genetic rescue options for a critically endangered parrot

by Carolyn J. Hogg, Caitlin Morrison, Jessica S. Dudley, David E. Alquezar‐Planas, Perry G. Beasley‐Hall, Michael J. L. Magrath, Simon Y. W. Ho, Nathan Lo, Rebecca N. Johnson, Catherine E. Grueber
Published 2021-09-01