A clustering approach for detecting implausible observation values in electronic health records data

by Hossein Estiri, Jeffrey G. Klann, Shawn N. Murphy
Published 2019-07-01

Individualized prediction of COVID-19 adverse outcomes with MLHO

by Hossein Estiri, Zachary H. Strasser, Shawn N. Murphy
Published 2021-03-01

Data model harmonization for the All Of Us Research Program: Transforming i2b2 data into the OMOP common data model.

by Jeffrey G Klann, Matthew A H Joss, Kevin Embree, Shawn N Murphy
Published 2019-01-01

Implementation of informatics for integrating biology and the bedside (i2b2) platform as Docker containers

by Kavishwar B. Wagholikar, Pralav Dessai, Javier Sanz, Michael E. Mendis, Douglas S. Bell, Shawn N. Murphy
Published 2018-07-01

Predicting COVID-19 mortality with electronic medical records

by Hossein Estiri, Zachary H. Strasser, Jeffy G. Klann, Pourandokht Naseri, Kavishwar B. Wagholikar, Shawn N. Murphy
Published 2021-02-01

Combining clinical and genomics queries using i2b2 - Three methods.

by Shawn N Murphy, Paul Avillach, Riccardo Bellazzi, Lori Phillips, Matteo Gabetta, Alal Eran, Michael T McDuffie, Isaac S Kohane
Published 2017-01-01

Correction to: Association between inflammation and systolic blood pressure in RA compared to patients without RA

by Zhi Yu, Seoyoung C. Kim, Kathleen Vanni, Jie Huang, Rishi Desai, Shawn N. Murphy, Daniel H. Solomon, Katherine P. Liao
Published 2019-07-01

Association between inflammation and systolic blood pressure in RA compared to patients without RA

by Zhi Yu, Seoyoung C. Kim, Kathleen Vanni, Jie Huang, Rishi Desai, Shawn N. Murphy, Daniel H. Solomon, Katherine P. Liao
Published 2018-06-01

An eMERGE Clinical Center at Partners Personalized Medicine

by Jordan W. Smoller, Elizabeth W. Karlson, Robert C. Green, Sekar Kathiresan, Daniel G. MacArthur, Michael E. Talkowski, Shawn N. Murphy, Scott T. Weiss
Published 2016-01-01

Evolving phenotypes of non-hospitalized patients that indicate long COVID

by Hossein Estiri, Zachary H. Strasser, Gabriel A. Brat, Yevgeniy R. Semenov, The Consortium for Characterization of COVID-19 by EHR (4CE), Chirag J. Patel, Shawn N. Murphy
Published 2021-09-01

Transitive Sequencing Medical Records for Mining Predictive and Interpretable Temporal Representations

by Hossein Estiri, Zachary H. Strasser, Jeffery G. Klann, Thomas H. McCoy, Jr., Kavishwar B. Wagholikar, Sebastien Vasey, Victor M. Castro, MaryKate E. Murphy, Shawn N. Murphy
Published 2020-07-01

SHRINE: enabling nationally scalable multi-site disease studies.

by Andrew J McMurry, Shawn N Murphy, Douglas MacFadden, Griffin Weber, William W Simons, John Orechia, Jonathan Bickel, Nich Wattanasin, Clint Gilbert, Philip Trevvett, Susanne Churchill, Isaac S Kohane
Published 2013-01-01

Cloud Services for Patient Cohort Identification Using the Informatics for Integrating Biology and the Bedside Platform

by Kavishwar B. Wagholikar, Shreekanth V. Joshi, Vishal V. Pai Vernekar, Yuri Ostrovsky, Somnath D. Desai, Pooja B. Magdum, Sachin B. Wakle, Sheetal Jain, Akshay Zagade, Rahul Patel, Shawn N. Murphy
Published 2020-01-01

Morphological variables associated with ruptured basilar tip aneurysms

by Jian Zhang, Anil Can, Pui Man Rosalind Lai, Srinivasan Mukundan, Victor M. Castro, Dmitriy Dligach, Sean Finan, Vivian S. Gainer, Nancy A. Shadick, Guergana Savova, Shawn N. Murphy, Tianxi Cai, Scott T. Weiss, Rose Du
Published 2021-01-01

Tobacco use and age are associated with different morphologic features of anterior communicating artery aneurysms

by Jian Zhang, Pui Man Rosalind Lai, Anil Can, Srinivasan Mukundan, Victor M. Castro, Dmitriy Dligach, Sean Finan, Vivian S. Gainer, Nancy A. Shadick, Guergana Savova, Shawn N. Murphy, Tianxi Cai, Scott T. Weiss, Rose Du
Published 2021-02-01

Mining multi-site clinical data to develop machine learning MRI biomarkers: application to neonatal hypoxic ischemic encephalopathy

by Rebecca J. Weiss, Sara V. Bates, Ya’nan Song, Yue Zhang, Emily M. Herzberg, Yih-Chieh Chen, Maryann Gong, Isabel Chien, Lily Zhang, Shawn N. Murphy, Randy L. Gollub, P. Ellen Grant, Yangming Ou
Published 2019-11-01

Age and morphology of posterior communicating artery aneurysms

by Jian Zhang, Anil Can, Pui Man Rosalind Lai, Srinivasan Mukundan, Victor M. Castro, Dmitriy Dligach, Sean Finan, Sheng Yu, Vivian S. Gainer, Nancy A. Shadick, Guergana Savova, Shawn N. Murphy, Tianxi Cai, Scott T. Weiss, Rose Du
Published 2020-07-01

Methods to Develop an Electronic Medical Record Phenotype Algorithm to Compare the Risk of Coronary Artery Disease across 3 Chronic Disease Cohorts.

by Katherine P Liao, Ashwin N Ananthakrishnan, Vishesh Kumar, Zongqi Xia, Andrew Cagan, Vivian S Gainer, Sergey Goryachev, Pei Chen, Guergana K Savova, Denis Agniel, Susanne Churchill, Jaeyoung Lee, Shawn N Murphy, Robert M Plenge, Peter Szolovits, Isaac Kohane, Stanley Y Shaw, Elizabeth W Karlson, Tianxi Cai
Published 2015-01-01

Modeling disease severity in multiple sclerosis using electronic health records.

by Zongqi Xia, Elizabeth Secor, Lori B Chibnik, Riley M Bove, Suchun Cheng, Tanuja Chitnis, Andrew Cagan, Vivian S Gainer, Pei J Chen, Katherine P Liao, Stanley Y Shaw, Ashwin N Ananthakrishnan, Peter Szolovits, Howard L Weiner, Elizabeth W Karlson, Shawn N Murphy, Guergana K Savova, Tianxi Cai, Susanne E Churchill, Robert M Plenge, Isaac S Kohane, Philip L De Jager
Published 2013-01-01

Hypertension prevalence in the All of Us Research Program among groups traditionally underrepresented in medical research

by Paulette D. Chandler, Cheryl R. Clark, Guohai Zhou, Nyia L. Noel, Confidence Achilike, Lizette Mendez, Andrea H. Ramirez, Roxana Loperena-Cortes, Kelsey Mayo, Elizabeth Cohn, Lucila Ohno-Machado, Eric Boerwinkle, Mine Cicek, Jun Qian, Sheri Schully, Francis Ratsimbazafy, Stephen Mockrin, Kelly Gebo, Julien J. Dedier, Shawn N. Murphy, Jordan W. Smoller, Elizabeth W. Karlson, the All of Us Research Program Investigators
Published 2021-06-01