A Tool to Encourage Minimum Reporting Guideline Uptake for Data Analysis in Metabolomics

by Elizabeth C. Considine, Reza M. Salek
Published 2019-03-01

Improving sample classification by harnessing the potential of 1H-NMR signal chemical shifts

by Daniel Cañueto, Reza M. Salek, Xavier Correig, Nicolau Cañellas
Published 2018-08-01

Information Retrieval Using Machine Learning for Biomarker Curation in the Exposome-Explorer

by Andre Lamurias, Sofia Jesus, Vanessa Neveu, Reza M. Salek, Francisco M. Couto
Published 2021-08-01

Metabolome Informatics and Statistics: Current State and Emerging Trends

by Adam James Carroll, Reza M Salek, Masanori Arita, Joachim Kopka, Dirk Walther
Published 2016-07-01

The ABRF Metabolomics Research Group 2016 Exploratory Study: Investigation of Data Analysis Methods for Untargeted Metabolomics

by Christoph W. Turck, Tytus D Mak, Maryam Goudarzi, Reza M Salek, Amrita K Cheema
Published 2020-03-01

Mind the Gap: Mapping Mass Spectral Databases in Genome-Scale Metabolic Networks Reveals Poorly Covered Areas

by Clément Frainay, Emma L. Schymanski, Steffen Neumann, Benjamin Merlet, Reza M. Salek, Fabien Jourdan, Oscar Yanes
Published 2018-09-01

Cross-Platform Evaluation of Commercially Targeted and Untargeted Metabolomics Approaches to Optimize the Investigation of Psychiatric Disease

by Lauren E. Chaby, Heather C. Lasseter, Kévin Contrepois, Reza M. Salek, Christoph W. Turck, Andrew Thompson, Timothy Vaughan, Magali Haas, Andreas Jeromin
Published 2021-09-01

The Metabolomics Society—Current State of the Membership and Future Directions

by Krista A. Zanetti, Robert D. Hall, Julian L. Griffin, Sastia Putri, Reza M. Salek, Mark P. Styczynski, Fidele Tugizimana, Justin J.J. van der Hooft
Published 2019-05-01

The Time Is Right to Focus on Model Organism Metabolomes

by Arthur S. Edison, Robert D. Hall, Christophe Junot, Peter D. Karp, Irwin J. Kurland, Robert Mistrik, Laura K. Reed, Kazuki Saito, Reza M. Salek, Christoph Steinbeck, Lloyd W. Sumner, Mark R. Viant
Published 2016-02-01

Use cases, best practice and reporting standards for metabolomics in regulatory toxicology

by Mark R. Viant, Timothy M. D. Ebbels, Richard D. Beger, Drew R. Ekman, David J. T. Epps, Hennicke Kamp, Pim E. G. Leonards, George D. Loizou, James I. MacRae, Bennard van Ravenzwaay, Philippe Rocca-Serra, Reza M. Salek, Tilmann Walk, Ralf J. M. Weber
Published 2019-07-01

The metaRbolomics Toolbox in Bioconductor and beyond

by Jan Stanstrup, Corey D. Broeckling, Rick Helmus, Nils Hoffmann, Ewy Mathé, Thomas Naake, Luca Nicolotti, Kristian Peters, Johannes Rainer, Reza M. Salek, Tobias Schulze, Emma L. Schymanski, Michael A. Stravs, Etienne A. Thévenot, Hendrik Treutler, Ralf J. M. Weber, Egon Willighagen, Michael Witting, Steffen Neumann
Published 2019-09-01

Genome-wide association study of metabolic traits reveals novel gene-metabolite-disease links.

by Rico Rueedi, Mirko Ledda, Andrew W Nicholls, Reza M Salek, Pedro Marques-Vidal, Edgard Morya, Koichi Sameshima, Ivan Montoliu, Laeticia Da Silva, Sebastiano Collino, François-Pierre Martin, Serge Rezzi, Christoph Steinbeck, Dawn M Waterworth, Gérard Waeber, Peter Vollenweider, Jacques S Beckmann, Johannes Le Coutre, Vincent Mooser, Sven Bergmann, Ulrich K Genick, Zoltán Kutalik
Published 2014-02-01

The future of metabolomics in ELIXIR [version 1; referees: 2 approved, 1 approved with reservations]

by Merlijn van Rijswijk, Charlie Beirnaert, Christophe Caron, Marta Cascante, Victoria Dominguez, Warwick B. Dunn, Timothy M. D. Ebbels, Franck Giacomoni, Alejandra Gonzalez-Beltran, Thomas Hankemeier, Kenneth Haug, Jose L. Izquierdo-Garcia, Rafael C. Jimenez, Fabien Jourdan, Namrata Kale, Maria I. Klapa, Oliver Kohlbacher, Kairi Koort, Kim Kultima, Gildas Le Corguillé, Nicholas K. Moschonas, Steffen Neumann, Claire O’Donovan, Martin Reczko, Philippe Rocca-Serra, Antonio Rosato, Reza M. Salek, Susanna-Assunta Sansone, Venkata Satagopam, Daniel Schober, Ruth Shimmo, Rachel A. Spicer, Ola Spjuth, Etienne A. Thévenot, Mark R. Viant, Ralf J. M. Weber, Egon L. Willighagen, Gianluigi Zanetti, Christoph Steinbeck
Published 2017-09-01

The future of metabolomics in ELIXIR [version 2; referees: 2 approved, 1 approved with reservations]

by Merlijn van Rijswijk, Charlie Beirnaert, Christophe Caron, Marta Cascante, Victoria Dominguez, Warwick B. Dunn, Timothy M. D. Ebbels, Franck Giacomoni, Alejandra Gonzalez-Beltran, Thomas Hankemeier, Kenneth Haug, Jose L. Izquierdo-Garcia, Rafael C. Jimenez, Fabien Jourdan, Namrata Kale, Maria I. Klapa, Oliver Kohlbacher, Kairi Koort, Kim Kultima, Gildas Le Corguillé, Pablo Moreno, Nicholas K. Moschonas, Steffen Neumann, Claire O’Donovan, Martin Reczko, Philippe Rocca-Serra, Antonio Rosato, Reza M. Salek, Susanna-Assunta Sansone, Venkata Satagopam, Daniel Schober, Ruth Shimmo, Rachel A. Spicer, Ola Spjuth, Etienne A. Thévenot, Mark R. Viant, Ralf J. M. Weber, Egon L. Willighagen, Gianluigi Zanetti, Christoph Steinbeck
Published 2017-10-01

A New Pipeline for the Normalization and Pooling of Metabolomics Data

by Vivian Viallon, Mathilde His, Sabina Rinaldi, Marie Breeur, Audrey Gicquiau, Bertrand Hemon, Kim Overvad, Anne Tjønneland, Agnetha Linn Rostgaard-Hansen, Joseph A. Rothwell, Lucie Lecuyer, Gianluca Severi, Rudolf Kaaks, Theron Johnson, Matthias B. Schulze, Domenico Palli, Claudia Agnoli, Salvatore Panico, Rosario Tumino, Fulvio Ricceri, W. M. Monique Verschuren, Peter Engelfriet, Charlotte Onland-Moret, Roel Vermeulen, Therese Haugdahl Nøst, Ilona Urbarova, Raul Zamora-Ros, Miguel Rodriguez-Barranco, Pilar Amiano, José Maria Huerta, Eva Ardanaz, Olle Melander, Filip Ottoson, Linda Vidman, Matilda Rentoft, Julie A. Schmidt, Ruth C. Travis, Elisabete Weiderpass, Mattias Johansson, Laure Dossus, Mazda Jenab, Marc J. Gunter, Justo Lorenzo Bermejo, Dominique Scherer, Reza M. Salek, Pekka Keski-Rahkonen, Pietro Ferrari
Published 2021-09-01