Extensive horizontal gene transfer in cheese-associated bacteria

by Kevin S Bonham, Benjamin E Wolfe, Rachel J Dutton
Published 2017-06-01

Changes in the genetic requirements for microbial interactions with increasing community complexity

by Manon Morin, Emily C Pierce, Rachel J Dutton
Published 2018-09-01

Growth on Chitin Impacts the Transcriptome and Metabolite Profiles of Antibiotic-Producing Vibrio coralliilyticus S2052 and Photobacterium galatheae S2753

by Sonia Giubergia, Christopher Phippen, Kristian Fog Nielsen, Lone Gram, Rachel J. Dutton
Published 2017-01-01

Biotic Interactions Shape the Ecological Distributions of Staphylococcus Species

by Erik K. Kastman, Noelani Kamelamela, Josh W. Norville, Casey M. Cosetta, Rachel J. Dutton, Benjamin E. Wolfe
Published 2016-10-01

Erratum for Kastman et al., “Biotic Interactions Shape the Ecological Distributions of Staphylococcus Species”

by Erik K. Kastman, Noelani Kamelamela, Josh W. Norville, Casey M. Cosetta, Rachel J. Dutton, Benjamin E. Wolfe
Published 2017-03-01

Microbial Succession and Flavor Production in the Fermented Dairy Beverage Kefir

by Aaron M. Walsh, Fiona Crispie, Kieran Kilcawley, Orla O’Sullivan, Maurice G. O’Sullivan, Marcus J. Claesson, Paul D. Cotter, Rachel J. Dutton
Published 2016-10-01

Omics-Based Insights into Flavor Development and Microbial Succession within Surface-Ripened Cheese

by A. S. Bertuzzi, A. M. Walsh, J. J. Sheehan, P. D. Cotter, F. Crispie, P. L. H. McSweeney, K. N. Kilcawley, M. C. Rea, Rachel J. Dutton
Published 2018-01-01

mockrobiota: a Public Resource for Microbiome Bioinformatics Benchmarking

by Nicholas A. Bokulich, Jai Ram Rideout, William G. Mercurio, Arron Shiffer, Benjamin Wolfe, Corinne F. Maurice, Rachel J. Dutton, Peter J. Turnbaugh, Rob Knight, J. Gregory Caporaso, Josh D. Neufeld
Published 2016-10-01

Thermus and the Pink Discoloration Defect in Cheese

by Lisa Quigley, Daniel J. O’Sullivan, David Daly, Orla O’Sullivan, Zuzana Burdikova, Rostislav Vana, Tom P. Beresford, R. Paul Ross, Gerald F. Fitzgerald, Paul L. H. McSweeney, Linda Giblin, Jeremiah J. Sheehan, Paul D. Cotter, Rachel J. Dutton
Published 2016-06-01

From Sample to Multi-Omics Conclusions in under 48 Hours

by Robert A. Quinn, Jose A. Navas-Molina, Embriette R. Hyde, Se Jin Song, Yoshiki Vázquez-Baeza, Greg Humphrey, James Gaffney, Jeremiah J. Minich, Alexey V. Melnik, Jakob Herschend, Jeff DeReus, Austin Durant, Rachel J. Dutton, Mahdieh Khosroheidari, Clifford Green, Ricardo da Silva, Pieter C. Dorrestein, Rob Knight, Jack A. Gilbert
Published 2016-04-01