Comparative Genomics of Mycobacterium avium Subspecies Paratuberculosis Sheep Strains

by Rachel Mizzi, Verlaine J. Timms, Marian L. Price-Carter, Milan Gautam, Richard Whittington, Cord Heuer, Patrick J. Biggs, Patrick J. Biggs, Karren M. Plain
Published 2021-02-01

Sticky Genomes: Using NGS Evidence to Test Hybrid Speciation Hypotheses.

by Mary Morgan-Richards, Simon F K Hills, Patrick J Biggs, Steven A Trewick
Published 2016-01-01

The effect of carbohydrate sources: Sucrose, invert sugar and components of mānuka honey, on core bacteria in the digestive tract of adult honey bees (Apis mellifera).

by Michelle A Taylor, Alastair W Robertson, Patrick J Biggs, Kate K Richards, Daniel F Jones, Shanthi G Parkar
Published 2019-01-01

Comparison of the Pathogenic Potential of <i>Campylobacter jejuni</i>, <i>C. upsaliensis</i> and <i>C. helveticus</i> and Limitations of Using Larvae of <i>Galleria mellonella</i>...

by Krunoslav Bojanić, Els Acke, Wendi D. Roe, Jonathan C. Marshall, Angela J. Cornelius, Patrick J. Biggs, Anne C. Midwinter
Published 2020-08-01

Culture independent analysis using gnd as a target gene to assess Escherichia coli diversity and community structure

by Adrian L. Cookson, Patrick J. Biggs, Jonathan C. Marshall, Angela Reynolds, Rose M. Collis, Nigel P. French, Gale Brightwell
Published 2017-04-01

One dog's waste is another dog's wealth: A pilot study of fecal microbiota transplantation in dogs with acute hemorrhagic diarrhea syndrome.

by Arnon Gal, Patrick C Barko, Patrick J Biggs, Kristene R Gedye, Anne C Midwinter, David A Williams, Richard K Burchell, Paolo Pazzi
Published 2021-01-01

Resilience of Faecal Microbiota in Stabled Thoroughbred Horses Following Abrupt Dietary Transition between Freshly Cut Pasture and Three Forage-Based Diets

by Karlette A. Fernandes, Chris W. Rogers, Erica K. Gee, Sandra Kittelmann, Charlotte F. Bolwell, Emma N. Bermingham, Patrick J. Biggs, David G. Thomas
Published 2021-09-01

Seasonal Variation in the Faecal Microbiota of Mature Adult Horses Maintained on Pasture in New Zealand

by Karlette A. Fernandes, Erica K. Gee, Chris W. Rogers, Sandra Kittelmann, Patrick J. Biggs, Emma N. Bermingham, Charlotte F. Bolwell, David G. Thomas
Published 2021-08-01

Biochar in co-contaminated soil manipulates arsenic solubility and microbiological community structure, and promotes organochlorine degradation.

by Samuel J Gregory, Christopher W N Anderson, Marta Camps-Arbestain, Patrick J Biggs, Austen R D Ganley, Justin M O'Sullivan, Michael T McManus
Published 2015-01-01

Genomic epidemiology and carbon metabolism of Escherichia coli serogroup O145 reflect contrasting phylogenies.

by Rose M Collis, Patrick J Biggs, Anne C Midwinter, A Springer Browne, David A Wilkinson, Hamid Irshad, Nigel P French, Gale Brightwell, Adrian L Cookson
Published 2020-01-01

Whole-genome comparison of two Campylobacter jejuni isolates of the same sequence type reveals multiple loci of different ancestral lineage.

by Patrick J Biggs, Paul Fearnhead, Grant Hotter, Vathsala Mohan, Julie Collins-Emerson, Errol Kwan, Thomas E Besser, Adrian Cookson, Philip E Carter, Nigel P French
Published 2011-01-01

Genomic Analysis of Salmonella enterica Serovar Typhimurium DT160 Associated with a 14-Year Outbreak, New Zealand, 1998–2012

by Samuel J. Bloomfield, Jackie Benschop, Patrick J. Biggs, Jonathan C. Marshall, David T.S. Hayman, Philip E. Carter, Anne C. Midwinter, Alison E. Mather, Nigel P. French
Published 2017-06-01

Robust identification of noncoding RNA from transcriptomes requires phylogenetically-informed sampling.

by Stinus Lindgreen, Sinan Uğur Umu, Alicia Sook-Wei Lai, Hisham Eldai, Wenting Liu, Stephanie McGimpsey, Nicole E Wheeler, Patrick J Biggs, Nick R Thomson, Lars Barquist, Anthony M Poole, Paul P Gardner
Published 2014-10-01

Genomic and phenotypic comparison of two Salmonella Typhimurium strains responsible for consecutive salmonellosis outbreaks in New Zealand

by Samuel J. Bloomfield, Jackie Benschop, Anne C. Midwinter, Patrick J. Biggs, Jonathan C. Marshall, David T.S. Hayman, Philip E. Carter, Marian Price-Carter, Leah Toombs-Ruane, Holly Gray, Sara Burgess, Nigel P. French
Published 2021-10-01

Genomic Analysis of Fluoroquinolone- and Tetracycline-Resistant Campylobacter jejuni Sequence Type 6964 in Humans and Poultry, New Zealand, 2014–2016

by Nigel P. French, Ji Zhang, Glen P. Carter, Anne C. Midwinter, Patrick J. Biggs, Kristin Dyet, Brent J. Gilpin, Danielle J. Ingle, Kerry Mulqueen, Lynn E. Rogers, David A. Wilkinson, Sabrina S. Greening, Petra Muellner, Ahmed Fayaz, Deborah A. Williamson
Published 2019-12-01

Use of Genomics to Investigate Historical Importation of Shiga Toxin–Producing Escherichia coli Serogroup O26 and Nontoxigenic Variants into New Zealand

by A. Springer Browne, Patrick J. Biggs, David A. Wilkinson, Adrian L. Cookson, Anne C. Midwinter, Samuel J. Bloomfield, C. Reed Hranac, Lynn E. Rogers, Jonathan C. Marshall, Jackie Benschop, Helen Withers, Steve Hathaway, Tessy George, Patricia Jaros, Hamid Irshad, Yang Fong, Muriel Dufour, Naveena Karki, Taylor Winkleman, Nigel P. French
Published 2019-03-01

The Pacific Biosciences de novo assembled genome dataset from a parthenogenetic New Zealand wild population of the longhorned tick, Haemaphysalis longicornis Neumann, 1901

by Felix D. Guerrero, Kylie G. Bendele, Noushin Ghaffari, Joseph Guhlin, Kristene R. Gedye, Kevin E. Lawrence, Peter K. Dearden, Thomas W.R. Harrop, Allen C.G. Heath, Yanni Lun, Richard P. Metz, Pete Teel, Adalberto Perez de Leon, Patrick J. Biggs, William E. Pomroy, Charles D. Johnson, Philip D. Blood, Stanley E. Bellgard, Daniel M. Tompkins
Published 2019-12-01