Metagenome annotation using a distributed grid of undergraduate students.

by Pascal Hingamp, Céline Brochier, Emmanuel Talla, Daniel Gautheret, Denis Thieffry, Carl Herrmann
Published 2008-11-01

Degenerate PCR Primers to Reveal the Diversity of Giant Viruses in Coastal Waters

by Yanze Li, Pascal Hingamp, Hiroyasu Watai, Hisashi Endo, Takashi Yoshida, Hiroyuki Ogata
Published 2018-09-01

Linking Virus Genomes with Host Taxonomy

by Tomoko Mihara, Yosuke Nishimura, Yugo Shimizu, Hiroki Nishiyama, Genki Yoshikawa, Hideya Uehara, Pascal Hingamp, Susumu Goto, Hiroyuki Ogata
Published 2016-03-01

Environmental Viral Genomes Shed New Light on Virus-Host Interactions in the Ocean

by Yosuke Nishimura, Hiroyasu Watai, Takashi Honda, Tomoko Mihara, Kimiho Omae, Simon Roux, Romain Blanc-Mathieu, Keigo Yamamoto, Pascal Hingamp, Yoshihiko Sako, Matthew B. Sullivan, Susumu Goto, Hiroyuki Ogata, Takashi Yoshida, Hideyuki Tamaki
Published 2017-03-01

Submission of microarray data to public repositories.

by Catherine A Ball, Alvis Brazma, Helen Causton, Steve Chervitz, Ron Edgar, Pascal Hingamp, John C Matese, Helen Parkinson, John Quackenbush, Martin Ringwald, Susanna-Assunta Sansone, Gavin Sherlock, Paul Spellman, Chris Stoeckert, Yoshio Tateno, Ronald Taylor, Joseph White, Neil Winegarden
Published 2004-09-01

Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton

by Francisco M. Cornejo-Castillo, Ana M. Cabello, Guillem Salazar, Patricia Sánchez-Baracaldo, Gipsi Lima-Mendez, Pascal Hingamp, Adriana Alberti, Shinichi Sunagawa, Peer Bork, Colomban de Vargas, Jeroen Raes, Chris Bowler, Patrick Wincker, Jonathan P. Zehr, Josep M. Gasol, Ramon Massana, Silvia G. Acinas
Published 2016-03-01

Microbial abundance, activity and population genomic profiling with mOTUs2

by Alessio Milanese, Daniel R Mende, Lucas Paoli, Guillem Salazar, Hans-Joachim Ruscheweyh, Miguelangel Cuenca, Pascal Hingamp, Renato Alves, Paul I Costea, Luis Pedro Coelho, Thomas S. B. Schmidt, Alexandre Almeida, Alex L Mitchell, Robert D. Finn, Jaime Huerta-Cepas, Peer Bork, Georg Zeller, Shinichi Sunagawa
Published 2019-03-01

A holistic approach to marine eco-systems biology.

by Eric Karsenti, Silvia G Acinas, Peer Bork, Chris Bowler, Colomban De Vargas, Jeroen Raes, Matthew Sullivan, Detlev Arendt, Francesca Benzoni, Jean-Michel Claverie, Mick Follows, Gaby Gorsky, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Stefanie Kandels-Lewis, Uros Krzic, Fabrice Not, Hiroyuki Ogata, Stéphane Pesant, Emmanuel Georges Reynaud, Christian Sardet, Michael E Sieracki, Sabrina Speich, Didier Velayoudon, Jean Weissenbach, Patrick Wincker, Tara Oceans Consortium
Published 2011-10-01

Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities

by Silvia G. Acinas, Pablo Sánchez, Guillem Salazar, Francisco M. Cornejo-Castillo, Marta Sebastián, Ramiro Logares, Marta Royo-Llonch, Lucas Paoli, Shinichi Sunagawa, Pascal Hingamp, Hiroyuki Ogata, Gipsi Lima-Mendez, Simon Roux, José M. González, Jesús M. Arrieta, Intikhab S. Alam, Allan Kamau, Chris Bowler, Jeroen Raes, Stéphane Pesant, Peer Bork, Susana Agustí, Takashi Gojobori, Dolors Vaqué, Matthew B. Sullivan, Carlos Pedrós-Alió, Ramon Massana, Carlos M. Duarte, Josep M. Gasol
Published 2021-05-01

Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans

by Yoann Seeleuthner, Samuel Mondy, Vincent Lombard, Quentin Carradec, Eric Pelletier, Marc Wessner, Jade Leconte, Jean-François Mangot, Julie Poulain, Karine Labadie, Ramiro Logares, Shinichi Sunagawa, Véronique de Berardinis, Marcel Salanoubat, Céline Dimier, Stefanie Kandels-Lewis, Marc Picheral, Sarah Searson, Tara Oceans Coordinators, Stephane Pesant, Nicole Poulton, Ramunas Stepanauskas, Peer Bork, Chris Bowler, Pascal Hingamp, Matthew B. Sullivan, Daniele Iudicone, Ramon Massana, Jean-Marc Aury, Bernard Henrissat, Eric Karsenti, Olivier Jaillon, Mike Sieracki, Colomban de Vargas, Patrick Wincker
Published 2018-01-01

A global ocean atlas of eukaryotic genes

by Quentin Carradec, Eric Pelletier, Corinne Da Silva, Adriana Alberti, Yoann Seeleuthner, Romain Blanc-Mathieu, Gipsi Lima-Mendez, Fabio Rocha, Leila Tirichine, Karine Labadie, Amos Kirilovsky, Alexis Bertrand, Stefan Engelen, Mohammed-Amin Madoui, Raphaël Méheust, Julie Poulain, Sarah Romac, Daniel J. Richter, Genki Yoshikawa, Céline Dimier, Stefanie Kandels-Lewis, Marc Picheral, Sarah Searson, Tara Oceans Coordinators, Olivier Jaillon, Jean-Marc Aury, Eric Karsenti, Matthew B. Sullivan, Shinichi Sunagawa, Peer Bork, Fabrice Not, Pascal Hingamp, Jeroen Raes, Lionel Guidi, Hiroyuki Ogata, Colomban de Vargas, Daniele Iudicone, Chris Bowler, Patrick Wincker
Published 2018-01-01