NGS-Based Genotyping, High-Throughput Phenotyping and Genome-Wide Association Studies Laid the Foundations for Next-Generation Breeding in Horticultural Crops

by Nunzio D’Agostino, Pasquale Tripodi
Published 2017-09-01

The Tomato Interspecific NB-LRR Gene Arsenal and Its Impact on Breeding Strategies

by Giuseppe Andolfo, Nunzio D’Agostino, Luigi Frusciante, Maria Raffaella Ercolano
Published 2021-01-01

Biotechnological and Digital Revolution for Climate-Smart Plant Breeding

by Francesca Taranto, Alessandro Nicolia, Stefano Pavan, Pasquale De Vita, Nunzio D’Agostino
Published 2018-11-01

Liquid-phase sequence capture and targeted re-sequencing revealed novel polymorphisms in tomato genes belonging to the MEP carotenoid pathway

by Irma Terracciano, Concita Cantarella, Carlo Fasano, Teodoro Cardi, Giuseppe Mennella, Nunzio D’Agostino
Published 2017-07-01

Recommendations for Choosing the Genotyping Method and Best Practices for Quality Control in Crop Genome-Wide Association Studies

by Stefano Pavan, Stefano Pavan, Chiara Delvento, Luigi Ricciardi, Concetta Lotti, Elena Ciani, Nunzio D’Agostino
Published 2020-06-01

Impact of Wild Loci on the Allergenic Potential of Cultivated Tomato Fruits.

by Alessandra Ghiani, Nunzio D'Agostino, Sandra Citterio, Assunta Raiola, Riccardo Asero, Amalia Barone, Maria Manuela Rigano
Published 2016-01-01

De Novo Transcriptome Assembly of Cucurbita Pepo L. Leaf Tissue Infested by Aphis Gossypii

by Alessia Vitiello, Rosa Rao, Giandomenico Corrado, Pasquale Chiaiese, Maria Cristina Digilio, Riccardo Aiese Cigliano, Nunzio D’Agostino
Published 2018-09-01

The Complete Plastome Sequences of Eleven Capsicum Genotypes: Insights into DNA Variation and Molecular Evolution

by Nunzio D’Agostino, Rachele Tamburino, Concita Cantarella, Valentina De Carluccio, Lorenza Sannino, Salvatore Cozzolino, Teodoro Cardi, Nunzia Scotti
Published 2018-10-01

Cultivated Tomato (<i>Solanum lycopersicum</i> L.) Suffered a Severe Cytoplasmic Bottleneck during Domestication: Implications from Chloroplast Genomes

by Rachele Tamburino, Lorenza Sannino, Donata Cafasso, Concita Cantarella, Luigi Orrù, Teodoro Cardi, Salvatore Cozzolino, Nunzio D’Agostino, Nunzia Scotti
Published 2020-10-01

Whole Genome Scan Reveals Molecular Signatures of Divergence and Selection Related to Important Traits in Durum Wheat Germplasm

by Francesca Taranto, Nunzio D’Agostino, Monica Rodriguez, Monica Rodriguez, Stefano Pavan, Anna P. Minervini, Nicola Pecchioni, Roberto Papa, Pasquale De Vita
Published 2020-04-01

Zucchini Plants Alter Gene Expression and Emission of (E)-β-Caryophyllene Following Aphis gossypii Infestation

by Alessia Vitiello, Alessia Vitiello, Donata Molisso, Maria Cristina Digilio, Massimo Giorgini, Giandomenico Corrado, Toby J. A. Bruce, Nunzio D’Agostino, Rosa Rao
Published 2021-01-01

Transcriptome reprogramming, epigenetic modifications and alternative splicing orchestrate the tomato root response to the beneficial fungus Trichoderma harzianum

by Monica De Palma, Maria Salzano, Clizia Villano, Riccardo Aversano, Matteo Lorito, Michelina Ruocco, Teresa Docimo, Anna Lisa Piccinelli, Nunzio D’Agostino, Marina Tucci
Published 2019-01-01

Complete Sequence, Multichromosomal Architecture and Transcriptome Analysis of the <i>Solanum tuberosum</i> Mitochondrial Genome

by Jean-Stéphane Varré, Nunzio D’Agostino, Pascal Touzet, Sophie Gallina, Rachele Tamburino, Concita Cantarella, Elodie Ubrig, Teodoro Cardi, Laurence Drouard, José Manuel Gualberto, Nunzia Scotti
Published 2019-09-01

A Robust DNA Isolation Protocol from Filtered Commercial Olive Oil for PCR-Based Fingerprinting

by Luciana Piarulli, Michele Antonio Savoia, Francesca Taranto, Nunzio D’Agostino, Ruggiero Sardaro, Stefania Girone, Susanna Gadaleta, Vincenzo Fucili, Claudio De Giovanni, Cinzia Montemurro, Antonella Pasqualone, Valentina Fanelli
Published 2019-10-01

Genetic flow among olive populations within the Mediterranean basin

by Valentina di Rienzo, Sara Sion, Francesca Taranto, Nunzio D’Agostino, Cinzia Montemurro, Valentina Fanelli, Wilma Sabetta, Saliha Boucheffa, Abderezak Tamendjari, Antonella Pasqualone, Marion Zammit-Mangion, Monica Marilena Miazzi
Published 2018-07-01

A Distinct Genetic Cluster in Cultivated Chickpea as Revealed by Genome-wide Marker Discovery and Genotyping

by Stefano Pavan, Concetta Lotti, Angelo R. Marcotrigiano, Rosa Mazzeo, Nicoletta Bardaro, Valentina Bracuto, Francesca Ricciardi, Francesca Taranto, Nunzio D’Agostino, Adalgisa Schiavulli, Claudio De Giovanni, Cinzia Montemurro, Gabriella Sonnante, Luigi Ricciardi
Published 2017-07-01

Characterization of Celiac Disease-Related Epitopes and Gluten Fractions, and Identification of Associated Loci in Durum Wheat

by Francesca Taranto, Nunzio D’Agostino, Marcello Catellani, Luca Laviano, Domenico Ronga, Justyna Milc, Barbara Prandi, Fatma Boukid, Stefano Sforza, Sara Graziano, Mariolina Gullì, Giovanna Visioli, Nelson Marmiroli, Franz-W. Badeck, Anna Paola Minervini, Ivano Pecorella, Nicola Pecchioni, Pasquale De Vita, Enrico Francia
Published 2020-08-01

A Snapshot of the Emerging Tomato Genome Sequence

by Lukas A. Mueller, René Klein Lankhorst, Steven D. Tanksley, James J. Giovannoni, Ruth White, Julia Vrebalov, Zhangjun Fei, Joyce van Eck, Robert Buels, Adri A. Mills, Naama Menda, Isaak Y. Tecle, Aureliano Bombarely, Stephen Stack, Suzanne M. Royer, Song-Bin Chang, Lindsay A. Shearer, Byung Dong Kim, Sung-Hwan Jo, Cheol-Goo Hur, Doil Choi, Chang-Bao Li, Jiuhai Zhao, Hongling Jiang, Yu Geng, Yuanyuan Dai, Huajie Fan, Jinfeng Chen, Fei Lu, Jinfeng Shi, Shouhong Sun, Jianjun Chen, Xiaohua Yang, Chen Lu, Mingsheng Chen, Zhukuan Cheng, Chuanyou Li, Hongqing Ling, Yongbiao Xue, Ying Wang, Graham B. Seymour, Gerard J. Bishop, Glenn Bryan, Jane Rogers, Sarah Sims, Sarah Butcher, Daniel Buchan, James Abbott, Helen Beasley, Christine Nicholson, Clare Riddle, Sean Humphray, Karen McLaren, Saloni Mathur, Shailendra Vyas, Amolkumar U. Solanke, Rahul Kumar, Vikrant Gupta, Arun K. Sharma, Paramjit Khurana, Jitendra P. Khurana, Akhilesh Tyagi, Sarita, Parul Chowdhury, Smriti Shridhar, Debasis Chattopadhyay, Awadhesh Pandit, Pradeep Singh, Ajay Kumar, Rekha Dixit, Archana Singh, Sumera Praveen, Vivek Dalal, Mahavir Yadav, Irfan Ahmad Ghazi, Kishor Gaikwad, Tilak Raj Sharma, Trilochan Mohapatra, Nagendra Kumar Singh, Dóra Szinay, Hans de Jong, Sander Peters, Marjo van Staveren, Erwin Datema, Mark W.E.J. Fiers, Roeland C.H.J. van Ham, P. Lindhout, Murielle Philippot, Pierre Frasse, Farid Regad, Mohamed Zouine, Mondher Bouzayen, Erika Asamizu, Shusei Sato, Hiroyuki Fukuoka, Satoshi Tabata, Daisuke Shibata, Miguel A. Botella, M. Perez-Alonso, V. Fernandez-Pedrosa, Sonia Osorio, Amparo Mico, Antonio Granell, Zhonghua Zhang, Jun He, Sanwen Huang, Yongchen Du, Dongyu Qu, Longfei Liu, Dongyuan Liu, Jun Wang, Zhibiao Ye, Wencai Yang, Guoping Wang, Alessandro Vezzi, Sara Todesco, Giorgio Valle, Giulia Falcone, Marco Pietrella, Giovanni Giuliano, Silvana Grandillo, Alessandra Traini, Nunzio D'Agostino, Maria Luisa Chiusano, Mara Ercolano, Amalia Barone, Luigi Frusciante, Heiko Schoof, Anika Jöcker, Rémy Bruggmann, Manuel Spannagl, Klaus X.F. Mayer, Roderic Guigó, Francisco Camara, Stephane Rombauts, Jeffrey A. Fawcett, Yves Van de Peer, Sandra Knapp, Dani Zamir, Willem Stiekema
Published 2009-03-01