miTALOS v2: Analyzing Tissue Specific microRNA Function.

by Martin Preusse, Fabian J Theis, Nikola S Mueller
Published 2016-01-01

Single-cell RNA-seq denoising using a deep count autoencoder

by Gökcen Eraslan, Lukas M. Simon, Maria Mircea, Nikola S. Mueller, Fabian J. Theis
Published 2019-01-01

MicroRNA-Target Network Inference and Local Network Enrichment Analysis Identify Two microRNA Clusters with Distinct Functions in Head and Neck Squamous Cell Carcinoma

by Steffen Sass, Adriana Pitea, Kristian Unger, Julia Hess, Nikola S. Mueller, Fabian J. Theis
Published 2015-12-01

BART-Seq: cost-effective massively parallelized targeted sequencing for genomics, transcriptomics, and single-cell analysis

by Fatma Uzbas, Florian Opperer, Can Sönmezer, Dmitry Shaposhnikov, Steffen Sass, Christian Krendl, Philipp Angerer, Fabian J. Theis, Nikola S. Mueller, Micha Drukker
Published 2019-08-01

Integrative Analysis of MicroRNA and mRNA Data Reveals an Orchestrated Function of MicroRNAs in Skeletal Myocyte Differentiation in Response to TNF-α or IGF1.

by Swanhild U Meyer, Steffen Sass, Nikola S Mueller, Stefan Krebs, Stefan Bauersachs, Sebastian Kaiser, Helmut Blum, Christian Thirion, Sabine Krause, Fabian J Theis, Michael W Pfaffl
Published 2015-01-01

DeepWAS: Multivariate genotype-phenotype associations by directly integrating regulatory information using deep learning.

by Janine Arloth, Gökcen Eraslan, Till F M Andlauer, Jade Martins, Stella Iurato, Brigitte Kühnel, Melanie Waldenberger, Josef Frank, Ralf Gold, Bernhard Hemmer, Felix Luessi, Sandra Nischwitz, Friedemann Paul, Heinz Wiendl, Christian Gieger, Stefanie Heilmann-Heimbach, Tim Kacprowski, Matthias Laudes, Thomas Meitinger, Annette Peters, Rajesh Rawal, Konstantin Strauch, Susanne Lucae, Bertram Müller-Myhsok, Marcella Rietschel, Fabian J Theis, Elisabeth B Binder, Nikola S Mueller
Published 2020-02-01

Model Based Targeting of IL-6-Induced Inflammatory Responses in Cultured Primary Hepatocytes to Improve Application of the JAK Inhibitor Ruxolitinib

by Svantje Sobotta, Andreas Raue, Xiaoyun Huang, Joep Vanlier, Joep Vanlier, Anja Jünger, Sebastian Bohl, Ute Albrecht, Maximilian J. Hahnel, Stephanie Wolf, Nikola S. Mueller, Lorenza A. D'Alessandro, Stephanie Mueller-Bohl, Martin E. Boehm, Philippe Lucarelli, Sandra Bonefas, Georg Damm, Daniel Seehofer, Wolf D. Lehmann, Stefan Rose-John, Frank van der Hoeven, Norbert Gretz, Fabian J. Theis, Fabian J. Theis, Christian Ehlting, Johannes G. Bode, Jens Timmer, Jens Timmer, Marcel Schilling, Ursula Klingmüller
Published 2017-10-01