sourceR: Classification and source attribution of infectious agents among heterogeneous populations.

by Poppy Miller, Jonathan Marshall, Nigel French, Chris Jewell
Published 2017-05-01

A Review of Potential Public Health Impacts Associated With the Global Dairy Sector

by Leah Grout, Michael G. Baker, Nigel French, Simon Hales
Published 2020-02-01

A Review of Methods for Assessing the Environmental Health Impacts of an Agricultural System

by Leah Grout, Simon Hales, Nigel French, Michael G. Baker
Published 2018-06-01

Seasonality in human zoonotic enteric diseases: a systematic review.

by Aparna Lal, Simon Hales, Nigel French, Michael G Baker
Published 2012-01-01

Climate variability, weather and enteric disease incidence in New Zealand: time series analysis.

by Aparna Lal, Takayoshi Ikeda, Nigel French, Michael G Baker, Simon Hales
Published 2013-01-01

Phylogenomic Reconstruction Sheds Light on New Relationships and Timescale of Rails (Aves: Rallidae) Evolution

by Juan C. Garcia-R, Emily Moriarty Lemmon, Alan R. Lemmon, Nigel French
Published 2020-02-01

Local and global genetic diversity of protozoan parasites: Spatial distribution of Cryptosporidium and Giardia genotypes.

by Juan C Garcia-R, Nigel French, Anthony Pita, Niluka Velathanthiri, Rima Shrestha, David Hayman
Published 2017-07-01

Investigation of the validity of two Bayesian ancestral state reconstruction models for estimating Salmonella transmission during outbreaks.

by Samuel Bloomfield, Timothy Vaughan, Jackie Benschop, Jonathan Marshall, David Hayman, Patrick Biggs, Philip Carter, Nigel French
Published 2019-01-01

Quantifying risk factors for human brucellosis in rural northern Tanzania.

by Kunda John, Julie Fitzpatrick, Nigel French, Rudovick Kazwala, Dominic Kambarage, Godfrey S Mfinanga, Alastair MacMillan, Sarah Cleaveland
Published 2010-04-01

A 5000-fold increase in the specificity of a bacterial phosphotriesterase for malathion through combinatorial active site mutagenesis.

by Tatheer Naqvi, Andrew C Warden, Nigel French, Elena Sugrue, Paul D Carr, Colin J Jackson, Colin Scott
Published 2014-01-01

Real-Time Genomics for Tracking Severe Acute Respiratory Syndrome Coronavirus 2 Border Incursions after Virus Elimination, New Zealand

by Jordan Douglas, Jemma L. Geoghegan, James Hadfield, Remco Bouckaert, Matthew Storey, Xiaoyun Ren, Joep de Ligt, Nigel French, David Welch
Published 2021-09-01

Whole-Genome Sequencing of Salmonella Mississippi and Typhimurium Definitive Type 160, Australia and New Zealand

by Laura Ford, Danielle Ingle, Kathryn Glass, Mark Veitch, Deborah A. Williamson, Michelle Harlock, Joy Gregory, Russell Stafford, Nigel French, Samuel Bloomfield, Zoe Grange, Mary Lou Conway, Martyn D. Kirk
Published 2019-09-01

Genomic Insights Into Clinical Shiga Toxin-Producing Escherichia coli Strains: A 15-Year Period Survey in Jönköping, Sweden

by Xiangning Bai, Xiangning Bai, Ji Zhang, Ying Hua, Ying Hua, Cecilia Jernberg, Yanwen Xiong, Nigel French, Sture Löfgren, Ingela Hedenström, Anoop Ambikan, Sara Mernelius, Andreas Matussek, Andreas Matussek, Andreas Matussek, Andreas Matussek
Published 2021-02-01

Genomic epidemiology reveals transmission patterns and dynamics of SARS-CoV-2 in Aotearoa New Zealand

by Jemma L. Geoghegan, Xiaoyun Ren, Matthew Storey, James Hadfield, Lauren Jelley, Sarah Jefferies, Jill Sherwood, Shevaun Paine, Sue Huang, Jordan Douglas, Fábio K. Mendes, Andrew Sporle, Michael G. Baker, David R. Murdoch, Nigel French, Colin R. Simpson, David Welch, Alexei J. Drummond, Edward C. Holmes, Sebastián Duchêne, Joep de Ligt
Published 2020-12-01

Use of Genomics to Track Coronavirus Disease Outbreaks, New Zealand

by Jemma L. Geoghegan, Jordan Douglas, Xiaoyun Ren, Matthew Storey, James Hadfield, Olin K. Silander, Nikki E. Freed, Lauren Jelley, Sarah Jefferies, Jillian Sherwood, Shevaun Paine, Sue Huang, Andrew Sporle, Michael G. Baker, David R. Murdoch, Alexei J. Drummond, David Welch, Colin R. Simpson, Nigel French, Edward C. Holmes, Joep de Ligt
Published 2021-05-01

COVID-19 in New Zealand and the impact of the national response: a descriptive epidemiological study

by Sarah Jefferies, MD, Nigel French, ProfPhD, Charlotte Gilkison, MPH, Giles Graham, BSci, Virginia Hope, MPhil, Jonathan Marshall, PhD, Caroline McElnay, MSc, Andrea McNeill, PhD, Petra Muellner, PhD, Shevaun Paine, MAE, Namrata Prasad, MPH, Julia Scott, MPH, Jillian Sherwood, MBChB, Liang Yang, PhD, Patricia Priest, DPhil
Published 2020-11-01

Genomic Evidence of In-Flight Transmission of SARS-CoV-2 Despite Predeparture Testing

by Tara Swadi, Jemma L. Geoghegan, Tom Devine, Caroline McElnay, Jillian Sherwood, Phil Shoemack, Xiaoyun Ren, Matt Storey, Sarah Jefferies, Erasmus Smit, James Hadfield, Aoife Kenny, Lauren Jelley, Andrew Sporle, Andrea McNeill, G. Edwin Reynolds, Kip Mouldey, Lindsay Lowe, Gerard Sonder, Alexei J. Drummond, Sue Huang, David Welch, Edward C. Holmes, Nigel French, Colin R. Simpson, Joep de Ligt
Published 2021-03-01