Analysis of Fish Commonly Sold in Local Supermarkets Reveals the Presence of Pathogenic and Multidrug-Resistant Bacterial Communities

by Ama Okyere, Dayna Bishoff, Micah O Oyaro, Nadim J Ajami, Charles Darkoh
Published 2018-07-01

Successful collection of stool samples for microbiome analyses from a large community-based population of elderly men

by Melanie Abrahamson, Elizabeth Hooker, Nadim J. Ajami, Joseph F. Petrosino, Eric S. Orwoll
Published 2017-09-01

Maximal viral information recovery from sequence data using VirMAP

by Nadim J Ajami, Matthew C. Wong, Matthew C. Ross, Richard E. Lloyd, Joseph F. Petrosino
Published 2018-08-01

Development of the cutaneous microbiome in the preterm infant: A prospective longitudinal study.

by Mohan Pammi, Jacqueline L O'Brien, Nadim J Ajami, Matthew C Wong, James Versalovic, Joseph F Petrosino
Published 2017-01-01

Gastric Microbiota in <i>Helicobacter pylori</i>-Negative and -Positive Gastritis Among High Incidence of Gastric Cancer Area

by Boldbaatar Gantuya, Hashem B. El-Serag, Takashi Matsumoto, Nadim J. Ajami, Khasag Oyuntsetseg, Dashdorj Azzaya, Tomohisa Uchida, Yoshio Yamaoka
Published 2019-04-01

Sphingolipid metabolism potential in fecal microbiome and bronchiolitis in infants: a case–control study

by Kohei Hasegawa, Christopher J. Stewart, Jonathan M. Mansbach, Rachel W. Linnemann, Nadim J. Ajami, Joseph F. Petrosino, Carlos A. Camargo
Published 2017-07-01

Observational Cohort Study of Oral Mycobiome and Interkingdom Interactions over the Course of Induction Therapy for Leukemia

by Sarah Robinson, Christine B. Peterson, Pranoti Sahasrabhojane, Nadim J. Ajami, Samuel A. Shelburne, Dimitrios P. Kontoyiannis, Jessica R. Galloway-Peña
Published 2020-04-01

Molecular characterization of dengue virus reveals regional diversification of serotype 2 in Colombia

by Katherine Laiton-Donato, Diego A. Alvarez, Dioselina Peláez-Carvajal, Marcela Mercado, Nadim J. Ajami, Irene Bosch, José A. Usme-Ciro
Published 2019-05-01

Differential effects of selective and non-selective cyclooxygenase inhibitors on fecal microbiota in adult horses.

by Canaan M Whitfield-Cargile, Ana M Chamoun-Emanuelli, Noah D Cohen, Lauren M Richardson, Nadim J Ajami, Hannah J Dockery
Published 2018-01-01

Gut microbiome analysis by post: Evaluation of the optimal method to collect stool samples from infants within a national cohort study.

by Georgina M Williams, Sam D Leary, Nadim J Ajami, Saranna Chipper Keating, Joseph F Petrosin, Julian P Hamilton-Shield, Kathleen M Gillespie
Published 2019-01-01

Frequency of Tongue Cleaning Impacts the Human Tongue Microbiome Composition and Enterosalivary Circulation of Nitrate

by Gena D. Tribble, Nikola Angelov, Robin Weltman, Bing-Yan Wang, Sridhar V. Eswaran, Isabel C. Gay, Kavitha Parthasarathy, Doan-Hieu V. Dao, Katherine N. Richardson, Nadia M. Ismail, Iraida G. Sharina, Embriette R. Hyde, Nadim J. Ajami, Nadim J. Ajami, Joseph F. Petrosino, Joseph F. Petrosino, Nathan S. Bryan
Published 2019-03-01

Effects of tobacco smoke and electronic cigarette vapor exposure on the oral and gut microbiota in humans: a pilot study

by Christopher J. Stewart, Thomas A. Auchtung, Nadim J. Ajami, Kenia Velasquez, Daniel P. Smith, Richard De La Garza II, Ramiro Salas, Joseph F. Petrosino
Published 2018-04-01

Impact of environmental microbiota on human microbiota of workers in academic mouse research facilities: An observational study.

by Peggy S Lai, Joseph G Allen, Diane S Hutchinson, Nadim J Ajami, Joseph F Petrosino, Thomas Winters, Christopher Hug, Gary R Wartenberg, Jose Vallarino, David C Christiani
Published 2017-01-01

The NLRP3 inflammasome mediates DSS-induced intestinal inflammation in knockout mice

by Benjamin Umiker, Hyun-Hee Lee, Julia Cope, Nadim J. Ajami, Jean-Philippe Laine, Christine Fregeau, Heidi Ferguson, Stephen E Alves, Nunzio Sciammetta, Melanie Kleinschek, Michael Salmon
Published 2019-02-01

Oral microbiota reveals signs of acculturation in Mexican American women.

by Kristi L Hoffman, Diane S Hutchinson, Jerry Fowler, Daniel P Smith, Nadim J Ajami, Hua Zhao, Paul Scheet, Wong-Ho Chow, Joseph F Petrosino, Carrie R Daniel
Published 2018-01-01

Viral microRNA effects on pathogenesis of polyomavirus SV40 infections in syrian golden hamsters.

by Shaojie Zhang, Vojtech Sroller, Preeti Zanwar, Chun Jung Chen, Steven J Halvorson, Nadim J Ajami, Corey W Hecksel, Jody L Swain, Connie Wong, Christopher S Sullivan, Janet S Butel
Published 2014-02-01

Rotavirus infection induces glycan availability to promote ileum-specific changes in the microbiome aiding rotavirus virulence

by Melinda A. Engevik, Lori D. Banks, Kristen A. Engevik, Alexandra L. Chang-Graham, Jacob L. Perry, Diane S. Hutchinson, Nadim J. Ajami, Joseph F. Petrosino, Joseph M. Hyser
Published 2020-09-01

Habitual Sleep Duration and the Colonic Mucosa-Associated Gut Microbiota in Humans—A Pilot Study

by Ritwick Agrawal, Nadim J. Ajami, Sonal Malhotra, Liang Chen, Donna L. White, Amir Sharafkhaneh, Kristi L. Hoffman, David Y. Graham, Hashem B. El-Serag, Joseph F. Petrosino, Li Jiao
Published 2021-07-01

Investigating Colonization of the Healthy Adult Gastrointestinal Tract by Fungi

by Thomas A. Auchtung, Tatiana Y. Fofanova, Christopher J. Stewart, Andrea K. Nash, Matthew C. Wong, Jonathan R. Gesell, Jennifer M. Auchtung, Nadim J. Ajami, Joseph F. Petrosino, Aaron P. Mitchell
Published 2018-03-01

SMRT Sequencing of Paramecium Bursaria Chlorella Virus-1 Reveals Diverse Methylation Stability in Adenines Targeted by Restriction Modification Systems

by Samantha R. Coy, Samantha R. Coy, Eric R. Gann, Spiridon E. Papoulis, Michael E. Holder, Nadim J. Ajami, Joseph F. Petrosino, Erik R. Zinser, James L. Van Etten, Steven W. Wilhelm
Published 2020-05-01