Information-Theoretic Inference of Gene Networks Using Backward Elimination.

by Meyer, Patrick E., Marbach, Daniel, Roy, Sushmita, Kellis, Manolis
Published 2021

Network deconvolution as a general method to distinguish direct dependencies in networks

by Feizi-Khankandi, Soheil, Marbach, Daniel, Medard, Muriel, Kellis, Manolis
Published 2014

Wisdom of crowds for robust gene network inference

by Marbach, Daniel, Holmes, Benjamin Ray, Kellis, Manolis, DREAM5 Consortium
Published 2014

Tissue-specific regulatory circuits reveal variable modular perturbations across complex diseases

by Marbach, Daniel, Lamparter, David, Quon, Gerald, Kellis, Manolis, Kutalik, Zoltán, Bergmann, Sven
Published 2017

Revealing strengths and weaknesses of methods for gene network inference

by Marbach, Daniel, Schaffter, Thomas, Prill, Robert J., Mattiussi, Claudio, Floreano, Dario, Stolovitzky, Gustavo
Published 2011

Predictive Regulatory Models in of Transcriptional Networks

by Kahveci, Tamer, Marbach, Daniel, Roy, Sushmita, Ay, Ferhat, Meyer, Patrick E., Candeias, Rogerio, Bristow, Christopher A., Kellis, Manolis
Published 2012

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

by Kheradpour, Pouya, Bristow, Christopher A., Mag Washietl, Stefan, Ay, Ferhat, Jungreis, Irwin, Marbach, Daniel, Sealfon, Rachel Sima, Will, Sebastian, Berger, Bonnie, Kellis, Manolis, Roy, Sushmita, Ernst, Jason, Lin, Michael F., Meyer, Patrick E., Di Stefano, Luisa, Candeias, Rogerio, Nordman, Jared T., Orr-Weaver, Terry L.
Published 2013