Fast online deconvolution of calcium imaging data.

by Johannes Friedrich, Pengcheng Zhou, Liam Paninski
Published 2017-03-01

Smoothing of, and parameter estimation from, noisy biophysical recordings.

by Quentin J M Huys, Liam Paninski
Published 2009-05-01

Neuroprosthetic Decoder Training as Imitation Learning.

by Josh Merel, David Carlson, Liam Paninski, John P Cunningham
Published 2016-05-01

Encoder-decoder optimization for brain-computer interfaces.

by Josh Merel, Donald M Pianto, John P Cunningham, Liam Paninski
Published 2015-06-01

Reinforcement Learning Recruits Somata and Apical Dendrites across Layers of Primary Sensory Cortex

by Clay O. Lacefield, Eftychios A. Pnevmatikakis, Liam Paninski, Randy M. Bruno
Published 2019-02-01

BARcode DEmixing through Non-negative Spatial Regression (BarDensr).

by Shuonan Chen, Jackson Loper, Xiaoyin Chen, Alex Vaughan, Anthony M Zador, Liam Paninski
Published 2021-03-01

Efficient "Shotgun" Inference of Neural Connectivity from Highly Sub-sampled Activity Data.

by Daniel Soudry, Suraj Keshri, Patrick Stinson, Min-Hwan Oh, Garud Iyengar, Liam Paninski
Published 2015-10-01

Fast spatiotemporal smoothing of calcium measurements in dendritic trees.

by Eftychios A Pnevmatikakis, Keith Kelleher, Rebecca Chen, Petter Saggau, Krešimir Josić, Liam Paninski
Published 2012-06-01

A generalized linear model for estimating spectrotemporal receptive fields from responses to natural sounds.

by Ana Calabrese, Joseph W Schumacher, David M Schneider, Liam Paninski, Sarah M N Woolley
Published 2011-01-01

Multi-scale approaches for high-speed imaging and analysis of large neural populations.

by Johannes Friedrich, Weijian Yang, Daniel Soudry, Yu Mu, Misha B Ahrens, Rafael Yuste, Darcy S Peterka, Liam Paninski
Published 2017-08-01

Electrical stimulus artifact cancellation and neural spike detection on large multi-electrode arrays.

by Gonzalo E Mena, Lauren E Grosberg, Sasidhar Madugula, Paweł Hottowy, Alan Litke, John Cunningham, E J Chichilnisky, Liam Paninski
Published 2017-11-01

Localized semi-nonnegative matrix factorization (LocaNMF) of widefield calcium imaging data.

by Shreya Saxena, Ian Kinsella, Simon Musall, Sharon H Kim, Jozsef Meszaros, David N Thibodeaux, Carla Kim, John Cunningham, Elizabeth M C Hillman, Anne Churchland, Liam Paninski
Published 2020-04-01

High-fidelity estimates of spikes and subthreshold waveforms from 1-photon voltage imaging in vivo

by Michael E. Xie, Yoav Adam, Linlin Z. Fan, Urs L. Böhm, Ian Kinsella, Ding Zhou, Marton Rozsa, Amrita Singh, Karel Svoboda, Liam Paninski, Adam E. Cohen
Published 2021-04-01

Mapping nonlinear receptive field structure in primate retina at single cone resolution

by Jeremy Freeman, Greg D Field, Peter H Li, Martin Greschner, Deborah E Gunning, Keith Mathieson, Alexander Sher, Alan M Litke, Liam Paninski, Eero P Simoncelli, EJ Chichilnisky
Published 2015-10-01

Complementary networks of cortical somatostatin interneurons enforce layer specific control

by Alexander Naka, Julia Veit, Ben Shababo, Rebecca K Chance, Davide Risso, David Stafford, Benjamin Snyder, Andrew Egladyous, Desiree Chu, Savitha Sridharan, Daniel P Mossing, Liam Paninski, John Ngai, Hillel Adesnik
Published 2019-03-01

Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data

by Pengcheng Zhou, Shanna L Resendez, Jose Rodriguez-Romaguera, Jessica C Jimenez, Shay Q Neufeld, Andrea Giovannucci, Johannes Friedrich, Eftychios A Pnevmatikakis, Garret D Stuber, Rene Hen, Mazen A Kheirbek, Bernardo L Sabatini, Robert E Kass, Liam Paninski
Published 2018-02-01

Community-based benchmarking improves spike rate inference from two-photon calcium imaging data.

by Philipp Berens, Jeremy Freeman, Thomas Deneux, Nikolay Chenkov, Thomas McColgan, Artur Speiser, Jakob H Macke, Srinivas C Turaga, Patrick Mineault, Peter Rupprecht, Stephan Gerhard, Rainer W Friedrich, Johannes Friedrich, Liam Paninski, Marius Pachitariu, Kenneth D Harris, Ben Bolte, Timothy A Machado, Dario Ringach, Jasmine Stone, Luke E Rogerson, Nicolas J Sofroniew, Jacob Reimer, Emmanouil Froudarakis, Thomas Euler, Miroslav Román Rosón, Lucas Theis, Andreas S Tolias, Matthias Bethge
Published 2018-05-01