A New Method to Correct for Habitat Filtering in Microbial Correlation Networks

by Vanessa Brisson, Vanessa Brisson, Vanessa Brisson, Jennifer Schmidt, Trent R. Northen, Trent R. Northen, John P. Vogel, John P. Vogel, John P. Vogel, Amélie Gaudin, Amélie Gaudin
Published 2019-03-01

Use of Agrobacterium rhizogenes strain 18r12v and paromomycin selection for transformation of Brachypodium distachyon and Brachypodium sylvaticum

by Ray eCollier, Jennifer eBragg, Bryan Tarape Hernandez, John P. Vogel, John P. Vogel, Roger eThilmony
Published 2016-05-01

PolyCRACKER, a robust method for the unsupervised partitioning of polyploid subgenomes by signatures of repetitive DNA evolution

by Sean P. Gordon, Joshua J. Levy, John P. Vogel
Published 2019-07-01

Brachypodium sylvaticum, a model for perennial grasses: transformation and inbred line development.

by Michael A Steinwand, Hugh A Young, Jennifer N Bragg, Christian M Tobias, John P Vogel
Published 2013-01-01

Cross-species functional diversity within the PIN auxin efflux protein family

by Devin Lee O'Connor, Samuel Elton, Fabrizio Ticchiarelli, Mon Mandy Hsia, John P Vogel, Ottoline Leyser
Published 2017-10-01

A division in PIN-mediated auxin patterning during organ initiation in grasses.

by Devin L O'Connor, Adam Runions, Aaron Sluis, Jennifer Bragg, John P Vogel, Przemyslaw Prusinkiewicz, Sarah Hake
Published 2014-01-01

Association mapping by aerial drone reveals 213 genetic associations for Sorghum bicolor biomass traits under drought

by Jennifer E. Spindel, Jeffery Dahlberg, Matthew Colgan, Joy Hollingsworth, Julie Sievert, Scott H. Staggenborg, Robert Hutmacher, Christer Jansson, John P. Vogel
Published 2018-09-01

Identification of Candidate Susceptibility Genes to Puccinia graminis f. sp. tritici in Wheat

by Eva C. Henningsen, Vahid Omidvar, Rafael Della Coletta, Jean-Michel Michno, Erin Gilbert, Feng Li, Marisa E. Miller, Chad L. Myers, Chad L. Myers, Sean P. Gordon, John P. Vogel, John P. Vogel, Brian J. Steffenson, Shahryar F. Kianian, Shahryar F. Kianian, Cory D. Hirsch, Melania Figueroa
Published 2021-04-01

Generation and characterization of the Western Regional Research Center Brachypodium T-DNA insertional mutant collection.

by Jennifer N Bragg, Jiajie Wu, Sean P Gordon, Mara E Guttman, Roger Thilmony, Gerard R Lazo, Yong Q Gu, John P Vogel
Published 2012-01-01

A truncated NLR protein, TIR-NBS2, is required for activated defense responses in the exo70B1 mutant.

by Ting Zhao, Lu Rui, Juan Li, Marc T Nishimura, John P Vogel, Na Liu, Simu Liu, Yaofei Zhao, Jeffery L Dangl, Dingzhong Tang
Published 2015-01-01

Recreating Stable Brachypodium hybridum Allotetraploids by Uniting the Divergent Genomes of B. distachyon and B. stacei.

by Vinh Ha Dinh Thi, Olivier Coriton, Isabelle Le Clainche, Dominique Arnaud, Sean P Gordon, Gabriella Linc, Pilar Catalan, Robert Hasterok, John P Vogel, Joseph Jahier, Boulos Chalhoub
Published 2016-01-01

GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems

by Rubén Rellán-Álvarez, Guillaume Lobet, Heike Lindner, Pierre-Luc Pradier, Jose Sebastian, Muh-Ching Yee, Yu Geng, Charlotte Trontin, Therese LaRue, Amanda Schrager-Lavelle, Cara H Haney, Rita Nieu, Julin Maloof, John P Vogel, José R Dinneny
Published 2015-08-01

Fine mapping of the Bsr1 barley stripe mosaic virus resistance gene in the model grass Brachypodium distachyon.

by Yu Cui, Mi Yeon Lee, Naxin Huo, Jennifer Bragg, Lijie Yan, Cheng Yuan, Cui Li, Sara J Holditch, Jingzhong Xie, Ming-Cheng Luo, Dawei Li, Jialin Yu, Joel Martin, Wendy Schackwitz, Yong Qiang Gu, John P Vogel, Andrew O Jackson, Zhiyong Liu, David F Garvin
Published 2012-01-01

Plant single-cell solutions for energy and the environment

by Benjamin Cole, Dominique Bergmann, Crysten E. Blaby-Haas, Ian K. Blaby, Kristofer E. Bouchard, Siobhan M. Brady, Doina Ciobanu, Devin Coleman-Derr, Samuel Leiboff, Jenny C. Mortimer, Tatsuya Nobori, Seung Y. Rhee, Jeremy Schmutz, Blake A. Simmons, Anup K. Singh, Neelima Sinha, John P. Vogel, Ronan C. O’Malley, Axel Visel, Diane E. Dickel
Published 2021-08-01

A complete toolset for the study of Ustilago bromivora and Brachypodium sp. as a fungal-temperate grass pathosystem

by Franziska Rabe, Jason Bosch, Alexandra Stirnberg, Tilo Guse, Lisa Bauer, Denise Seitner, Fernando A Rabanal, Angelika Czedik-Eysenberg, Simon Uhse, Janos Bindics, Bianca Genenncher, Fernando Navarrete, Ronny Kellner, Heinz Ekker, Jochen Kumlehn, John P Vogel, Sean P Gordon, Thierry C Marcel, Martin Münsterkötter, Mathias C Walter, Christian MK Sieber, Gertrud Mannhaupt, Ulrich Güldener, Regine Kahmann, Armin Djamei
Published 2016-11-01

Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure

by Sean P. Gordon, Bruno Contreras-Moreira, Daniel P. Woods, David L. Des Marais, Diane Burgess, Shengqiang Shu, Christoph Stritt, Anne C. Roulin, Wendy Schackwitz, Ludmila Tyler, Joel Martin, Anna Lipzen, Niklas Dochy, Jeremy Phillips, Kerrie Barry, Koen Geuten, Hikmet Budak, Thomas E. Juenger, Richard Amasino, Ana L. Caicedo, David Goodstein, Patrick Davidson, Luis A. J. Mur, Melania Figueroa, Michael Freeling, Pilar Catalan, John P. Vogel
Published 2017-12-01

Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors

by Sean P. Gordon, Bruno Contreras-Moreira, Joshua J. Levy, Armin Djamei, Angelika Czedik-Eysenberg, Virginia S. Tartaglio, Adam Session, Joel Martin, Amy Cartwright, Andrew Katz, Vasanth R. Singan, Eugene Goltsman, Kerrie Barry, Vinh Ha Dinh-Thi, Boulos Chalhoub, Antonio Diaz-Perez, Ruben Sancho, Joanna Lusinska, Elzbieta Wolny, Candida Nibau, John H. Doonan, Luis A. J. Mur, Chris Plott, Jerry Jenkins, Samuel P. Hazen, Scott J. Lee, Shengqiang Shu, David Goodstein, Daniel Rokhsar, Jeremy Schmutz, Robert Hasterok, Pilar Catalan, John P. Vogel
Published 2020-07-01