Finding associations among histone modifications using sparse partial correlation networks.

by Julia Lasserre, Ho-Ryun Chung, Martin Vingron
Published 2013-01-01

EPIGENE: genome-wide transcription unit annotation using a multivariate probabilistic model of histone modifications

by Anshupa Sahu, Na Li, Ilona Dunkel, Ho-Ryun Chung
Published 2020-04-01

coTRaCTE predicts co-occurring transcription factors within cell-type specific enhancers.

by Alena van Bömmel, Michael I Love, Ho-Ryun Chung, Martin Vingron
Published 2018-08-01

C1q/TNF-Related Protein 3 (CTRP-3) Deficiency of Adipocytes Affects White Adipose Tissue Mass but Not Systemic CTRP-3 Concentrations

by Andreas Schmid, Martin Roderfeld, Jonas Gehl, Elke Roeb, Andrea Nist, Ho-Ryun Chung, Thorsten Stiewe, Thomas Karrasch, Andreas Schäffler
Published 2021-02-01

The effect of micrococcal nuclease digestion on nucleosome positioning data.

by Ho-Ryun Chung, Ilona Dunkel, Franziska Heise, Christian Linke, Sylvia Krobitsch, Ann E Ehrenhofer-Murray, Silke R Sperling, Martin Vingron
Published 2010-01-01

reChIP-seq reveals widespread bivalency of H3K4me3 and H3K27me3 in CD4+ memory T cells

by Sarah Kinkley, Johannes Helmuth, Julia K. Polansky, Ilona Dunkel, Gilles Gasparoni, Sebastian Fröhler, Wei Chen, Jörn Walter, Alf Hamann, Ho-Ryun Chung
Published 2016-08-01

Epigenomic Co-localization and Co-evolution Reveal a Key Role for 5hmC as a Communication Hub in the Chromatin Network of ESCs

by David Juan, Juliane Perner, Enrique Carrillo de Santa Pau, Simone Marsili, David Ochoa, Ho-Ryun Chung, Martin Vingron, Daniel Rico, Alfonso Valencia
Published 2016-02-01

PHF13 is a molecular reader and transcriptional co-regulator of H3K4me2/3

by Ho-Ryun Chung, Chao Xu, Alisa Fuchs, Andreas Mund, Martin Lange, Hannah Staege, Tobias Schubert, Chuanbing Bian, Ilona Dunkel, Anton Eberharter, Catherine Regnard, Henrike Klinker, David Meierhofer, Luca Cozzuto, Andreas Winterpacht, Luciano Di Croce, Jinrong Min, Hans Will, Sarah Kinkley
Published 2016-05-01

Gain-of-function screen for genes that affect Drosophila muscle pattern formation.

by Nicole Staudt, Andreas Molitor, Kalman Somogyi, Juan Mata, Silvia Curado, Karsten Eulenberg, Martin Meise, Thomas Siegmund, Thomas Häder, Andres Hilfiker, Günter Brönner, Anne Ephrussi, Pernille Rørth, Stephen M Cohen, Sonja Fellert, Ho-Ryun Chung, Olaf Piepenburg, Ulrich Schäfer, Herbert Jäckle, Gerd Vorbrüggen
Published 2005-10-01

CRUP: a comprehensive framework to predict condition-specific regulatory units

by Anna Ramisch, Verena Heinrich, Laura V. Glaser, Alisa Fuchs, Xinyi Yang, Philipp Benner, Robert Schöpflin, Na Li, Sarah Kinkley, Anja Römer-Hillmann, John Longinotto, Steffen Heyne, Beate Czepukojc, Sonja M. Kessler, Alexandra K. Kiemer, Cristina Cadenas, Laura Arrigoni, Nina Gasparoni, Thomas Manke, Thomas Pap, John A. Pospisilik, Jan Hengstler, Jörn Walter, Sebastiaan H. Meijsing, Ho-Ryun Chung, Martin Vingron
Published 2019-11-01

Lasp1 regulates adherens junction dynamics and fibroblast transformation in destructive arthritis

by Denise Beckmann, Anja Römer-Hillmann, Annika Krause, Uwe Hansen, Corinna Wehmeyer, Johanna Intemann, David J. J. de Gorter, Berno Dankbar, Jan Hillen, Marianne Heitzmann, Isabell Begemann, Milos Galic, Toni Weinhage, Dirk Foell, Rizi Ai, Joachim Kremerskothen, Hans P. Kiener, Sylvia Müller, Thomas Kamradt, Christopher Schröder, Elsa Leitão, Bernhard Horsthemke, Philip Rosenstiel, Karl Nordström, Gilles Gasparoni, Nina Gasparoni, Jörn Walter, Na Li, Xinyi Yang, Ho-Ryun Chung, Hermann Pavenstädt, Nico Lindemann, Hans J. Schnittler, Wei Wang, Gary S. Firestein, Thomas Pap, Adelheid Korb-Pap
Published 2021-06-01

Enhanced genome assembly and a new official gene set for Tribolium castaneum

by Nicolae Herndon, Jennifer Shelton, Lizzy Gerischer, Panos Ioannidis, Maria Ninova, Jürgen Dönitz, Robert M. Waterhouse, Chun Liang, Carsten Damm, Janna Siemanowski, Peter Kitzmann, Julia Ulrich, Stefan Dippel, Georg Oberhofer, Yonggang Hu, Jonas Schwirz, Magdalena Schacht, Sabrina Lehmann, Alice Montino, Nico Posnien, Daniela Gurska, Thorsten Horn, Jan Seibert, Iris M. Vargas Jentzsch, Kristen A. Panfilio, Jianwei Li, Ernst A. Wimmer, Dominik Stappert, Siegfried Roth, Reinhard Schröder, Yoonseong Park, Michael Schoppmeier, Ho-Ryun Chung, Martin Klingler, Sebastian Kittelmann, Markus Friedrich, Rui Chen, Boran Altincicek, Andreas Vilcinskas, Evgeny Zdobnov, Sam Griffiths-Jones, Matthew Ronshaugen, Mario Stanke, Sue J. Brown, Gregor Bucher
Published 2020-01-01

New-onset IgG autoantibodies in hospitalized patients with COVID-19

by Sarah Esther Chang, Allan Feng, Wenzhao Meng, Sokratis A. Apostolidis, Elisabeth Mack, Maja Artandi, Linda Barman, Kate Bennett, Saborni Chakraborty, Iris Chang, Peggie Cheung, Sharon Chinthrajah, Shaurya Dhingra, Evan Do, Amanda Finck, Andrew Gaano, Reinhard Geßner, Heather M. Giannini, Joyce Gonzalez, Sarah Greib, Margrit Gündisch, Alex Ren Hsu, Alex Kuo, Monali Manohar, Rong Mao, Indira Neeli, Andreas Neubauer, Oluwatosin Oniyide, Abigail E. Powell, Rajan Puri, Harald Renz, Jeffrey Schapiro, Payton A. Weidenbacher, Richard Wittman, Neera Ahuja, Ho-Ryun Chung, Prasanna Jagannathan, Judith A. James, Peter S. Kim, Nuala J. Meyer, Kari C. Nadeau, Marko Radic, William H. Robinson, Upinder Singh, Taia T. Wang, E. John Wherry, Chrysanthi Skevaki, Eline T. Luning Prak, Paul J. Utz
Published 2021-09-01