MediPlEx - a tool to combine in silico & experimental gene expression profiles of the model legume Medicago truncatula

by Stutz Leonhard J, Küster Helge, Henckel Kolja, Goesmann Alexander
Published 2010-10-01

WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads

by Jünemann Sebastian, Gerlach Wolfgang, Tille Felix, Goesmann Alexander, Stoye Jens
Published 2009-12-01

Unique core genomes of the bacterial family <it>vibrionaceae</it>: insights into niche adaptation and speciation

by Kahlke Tim, Goesmann Alexander, Hjerde Erik, Willassen Nils, Haugen Peik
Published 2012-05-01

TACOA – Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach

by Goesmann Alexander, Krause Lutz, Diaz Naryttza N, Niehaus Karsten, Nattkemper Tim W
Published 2009-02-01

TRUNCATULIX – a data warehouse for the legume community

by Runte Kai J, Henckel Kolja, Bekel Thomas, Dondrup Michael, Jakobi Tobias, Küster Helge, Goesmann Alexander
Published 2009-02-01

Comparative gene expression in toxic versus non-toxic strains of the marine dinoflagellate <it>Alexandrium minutum</it>

by Glöckner Gernot, Beszteri Sára, John Uwe, Yang Ines, Krock Bernd, Goesmann Alexander, Cembella Allan D
Published 2010-04-01

Sequencing, annotation, and comparative genome analysis of the gerbil-adapted <it>Helicobacter pylori</it> strain B8

by Goesmann Alexander, Haas Rainer, Daniel Rolf, Willrodt Dirk, Jahns Thomas, Farnbacher Max, Kurtz Stefan, Rieder Gabriele
Published 2010-05-01

Construction and evaluation of a whole genome microarray of <it>Chlamydomonas reinhardtii</it>

by Toepel Jörg, Albaum Stefan P, Arvidsson Samuel, Goesmann Alexander, la Russa Marco, Rogge Kristin, Kruse Olaf
Published 2011-11-01

Complete genome sequence of the fire blight pathogen <it>Erwinia pyrifoliae </it>DSM 12163^Tand comparative genomic insights into plant pathogenicity

by Frey Jürg E, Goesmann Alexander, Kamber Tim, Rezzonico Fabio, Jaenicke Sebastian, Smits Theo HM, Duffy Brion
Published 2010-01-01

EDGAR: A software framework for the comparative analysis of prokaryotic genomes

by Vorhölter Frank-Jörg, Pühler Alfred, Doppmeier Daniel, Albaum Stefan P, Blom Jochen, Zakrzewski Martha, Goesmann Alexander
Published 2009-05-01

A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study

by Haußmann Ute, Otto Andreas, Hahne Hannes, Albaum Stefan P, Becher Dörte, Poetsch Ansgar, Goesmann Alexander, Nattkemper Tim W
Published 2011-06-01

Reassessment of the <it>Listeria monocytogenes</it> pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome

by Kuenne Carsten, Billion André, Mraheil Mobarak Abu, Strittmatter Axel, Daniel Rolf, Goesmann Alexander, Barbuddhe Sukhadeo, Hain Torsten, Chakraborty Trinad
Published 2013-01-01

Next-generation sequencing of the CHO cell transcriptome

by Becker Jennifer, Timmermann Christina, Jakobi Tobias, Rupp Oliver, Szczepanowski Rafael, Hackl Matthias, Goesmann Alexander, Tauch Andreas, Borth Nicole, Grillari Johannes, Pühler Alfred, Noll Thomas, Brinkrolf Karina
Published 2011-11-01

Complete genome sequence and lifestyle of black-pigmented <it>Corynebacterium aurimucosum </it>ATCC 700975 (formerly <it>C. nigricans </it>CN-1) isolated from a vaginal swab of a w...

by Gartemann Karl-Heinz, Blom Jochen, Bekel Thomas, Arnold Walter, Viehoever Prisca, Tilker Alexandra, Szczepanowski Rafael, Schneiker-Bekel Susanne, Schneider Jessica, Götker Susanne, Trost Eva, Linke Burkhard, Goesmann Alexander, Pühler Alfred, Shukla Sanjay K, Tauch Andreas
Published 2010-02-01

EMMA 2 – A MAGE-compliant system for the collaborative analysis and integration of microarray data

by Mertens Dominik, Linke Burkhard, Küster Helge, Kleindt Christiane K, Kahlke Tim, Jünemann Sebastian, Henckel Kolja, Griebel Thasso, Albaum Stefan P, Dondrup Michael, Mittard-Runte Virginie, Neuweger Heiko, Runte Kai J, Tauch Andreas, Tille Felix, Pühler Alfred, Goesmann Alexander
Published 2009-02-01

Comparative genomics and transcriptomics of lineages I, II, and III strains of <it>Listeria monocytogenes</it>

by Hain Torsten, Ghai Rohit, Billion André, Kuenne Carsten, Steinweg Christiane, Izar Benjamin, Mohamed Walid, Mraheil Mobarak, Domann Eugen, Schaffrath Silke, Kärst Uwe, Goesmann Alexander, Oehm Sebastian, Pühler Alfred, Merkl Rainer, Vorwerk Sonja, Glaser Philippe, Garrido Patricia, Rusniok Christophe, Buchrieser Carmen, Goebel Werner, Chakraborty Trinad
Published 2012-04-01

The complete genome sequence of <it>Corynebacterium pseudotuberculosis </it>FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulat...

by Azevedo Vasco, Ruiz Jeronimo, Silva Artur, Miyoshi Anderson, D'Afonseca Vívian, de Castro Soares Siomar, Rocha Flavia, Dorella Fernanda, Stoye Jens, Husemann Peter, Goesmann Alexander, Jaenicke Sebastian, Schröder Jasmin, Schneider Jessica, Ott Lisa, Trost Eva, Burkovski Andreas, Guiso Nicole, Join-Lambert Olivier F, Kayal Samer, Tauch Andreas
Published 2010-12-01

The missing link: <it>Bordetella petrii </it>is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae

by Schneiker-Bekel Susanne, Rückert Christian, Nakunst Diana, Mormann Sascha, Meyer Folker, Linke Burkhard, Link Stefanie, Larisch Christof, Khachane Amit N, Herrmann Stefanie, Gaigalat Lars, Ebensen Thomas, Choudhuri Jomuna V, Buhrmester Jens, Bartels Daniela, Lechner Melanie, Koebnik Ralf, Pieper Dietmar H, Martins dos Santos Vítor AP, Sebaihia Mohammed, Guzman Carlos A, Gross Roy, Schulze Kai, Vorhölter Frank-Jörg, Yevsa Tetyana, Engle Jacquelyn T, Goldman William E, Pühler Alfred, Göbel Ulf B, Goesmann Alexander, Blöcker Helmut, Kaiser Olaf, Martinez-Arias Rosa
Published 2008-09-01