You Are Not Working for Me; I Am Working with You.

by Florian Markowetz
Published 2015-09-01

How to understand the cell by breaking it: network analysis of gene perturbation screens.

by Florian Markowetz
Published 2010-02-01

All biology is computational biology.

by Florian Markowetz
Published 2017-03-01

SANTA: quantifying the functional content of molecular networks.

by Alex J Cornish, Florian Markowetz
Published 2014-09-01

Patient-specific data fusion defines prognostic cancer subtypes.

by Yinyin Yuan, Richard S Savage, Florian Markowetz
Published 2011-10-01

Genome-wide Estrogen Receptor-α activation is sustained, not cyclical

by Andrew N Holding, Amy E Cullen, Florian Markowetz
Published 2018-11-01

Master Regulators of Oncogenic KRAS Response in Pancreatic Cancer: An Integrative Network Biology Analysis.

by Shivan Sivakumar, Ines de Santiago, Leon Chlon, Florian Markowetz
Published 2017-01-01

Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations.

by Xin Wang, Mauro A Castro, Klaas W Mulder, Florian Markowetz
Published 2012-01-01

Patterns of Immune Infiltration in Breast Cancer and Their Clinical Implications: A Gene-Expression-Based Retrospective Study.

by H Raza Ali, Leon Chlon, Paul D P Pharoah, Florian Markowetz, Carlos Caldas
Published 2016-12-01

Phylogenetic quantification of intra-tumour heterogeneity.

by Roland F Schwarz, Anne Trinh, Botond Sipos, James D Brenton, Nick Goldman, Florian Markowetz
Published 2014-04-01

Mapping dynamic histone acetylation patterns to gene expression in nanog-depleted murine embryonic stem cells.

by Florian Markowetz, Klaas W Mulder, Edoardo M Airoldi, Ihor R Lemischka, Olga G Troyanskaya
Published 2010-12-01

Inferring modulators of genetic interactions with epistatic nested effects models.

by Martin Pirkl, Madeline Diekmann, Marlies van der Wees, Niko Beerenwinkel, Holger Fröhlich, Florian Markowetz
Published 2017-04-01

Evolutionary distances in the twilight zone--a rational kernel approach.

by Roland F Schwarz, William Fletcher, Frank Förster, Benjamin Merget, Matthias Wolf, Jörg Schultz, Florian Markowetz
Published 2010-12-01

Correction to: VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer

by Andrew N. Holding, Federico M. Giorgi, Amanda Donnelly, Amy E. Cullen, Sankari Nagarajan, Luke A. Selth, Florian Markowetz
Published 2019-06-01

VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer

by Andrew N. Holding, Federico M. Giorgi, Amanda Donnelly, Amy E. Cullen, Sankari Nagarajan, Luke A. Selth, Florian Markowetz
Published 2019-05-01

Decoding the Interdependence of Multiparametric Magnetic Resonance Imaging to Reveal Patient Subgroups Correlated with Survivals

by Chao Li, Shuo Wang, Pan Liu, Turid Torheim, Natalie R. Boonzaier, Bart RJ van Dijken, Carola-Bibiane Schönlieb, Florian Markowetz, Stephen J. Price
Published 2019-05-01

Intestinal region-specific Wnt signalling profiles reveal interrelation between cell identity and oncogenic pathway activity in cancer development

by Ronja S. Adam, Sanne M. van Neerven, Cayetano Pleguezuelos-Manzano, Salvatore Simmini, Nicolas Léveillé, Nina E. de Groot, Andrew N. Holding, Florian Markowetz, Louis Vermeulen
Published 2020-12-01

Inferring structural variant cancer cell fraction

by Marek Cmero, Ke Yuan, Cheng Soon Ong, Jan Schröder, PCAWG Evolution and Heterogeneity Working Group, Niall M. Corcoran, Tony Papenfuss, Christopher M. Hovens, Florian Markowetz, Geoff Macintyre, PCAWG Consortium
Published 2020-02-01

Integrative radiogenomics for virtual biopsy and treatment monitoring in ovarian cancer

by Paula Martin-Gonzalez, Mireia Crispin-Ortuzar, Leonardo Rundo, Maria Delgado-Ortet, Marika Reinius, Lucian Beer, Ramona Woitek, Stephan Ursprung, Helen Addley, James D. Brenton, Florian Markowetz, Evis Sala
Published 2020-08-01

Intratumor heterogeneity defines treatment‐resistant HER2+ breast tumors

by Inga H. Rye, Anne Trinh, Anna B. Sætersdal, Daniel Nebdal, Ole Christian Lingjærde, Vanessa Almendro, Kornelia Polyak, Anne‐Lise Børresen‐Dale, Åslaug Helland, Florian Markowetz, Hege G. Russnes
Published 2018-11-01