Higher throughput methods of identifying T cell epitopes for studying outcomes of altered antigen processing and presentation

by Evan W Newell
Published 2013-12-01

Deep Sequencing in Infectious Diseases: Immune and Pathogen Repertoires for the Improvement of Patient Outcomes

by William F. Burkholder, Evan W. Newell, Michael Poidinger, Swaine Chen, Katja Fink
Published 2017-06-01

Cytofkit: A Bioconductor Package for an Integrated Mass Cytometry Data Analysis Pipeline.

by Hao Chen, Mai Chan Lau, Michael Thomas Wong, Evan W Newell, Michael Poidinger, Jinmiao Chen
Published 2016-09-01

Regulation of hERG and hEAG channels by Src and by SHP-1 tyrosine phosphatase via an ITIM region in the cyclic nucleotide binding domain.

by Lyanne C Schlichter, Jiahua Jiang, John Wang, Evan W Newell, Florence W L Tsui, Doris Lam
Published 2014-01-01

Gamma delta T cells recognize haptens and mount a hapten-specific response

by Xun Zeng, Christina Meyer, Jun Huang, Evan W Newell, Brian A Kidd, Yu-Ling Wei, Yueh-hsiu Chien
Published 2014-09-01

Organ-Specific Fate, Recruitment, and Refilling Dynamics of Tissue-Resident Macrophages during Blood-Stage Malaria

by Si Min Lai, Jianpeng Sheng, Pravesh Gupta, Laurent Renia, Kaibo Duan, Francesca Zolezzi, Klaus Karjalainen, Evan W. Newell, Christiane Ruedl
Published 2018-12-01

OpenCyto: an open source infrastructure for scalable, robust, reproducible, and automated, end-to-end flow cytometry data analysis.

by Greg Finak, Jacob Frelinger, Wenxin Jiang, Evan W Newell, John Ramey, Mark M Davis, Spyros A Kalams, Stephen C De Rosa, Raphael Gottardo
Published 2014-08-01

A Targeted Multi-omic Analysis Approach Measures Protein Expression and Low-Abundance Transcripts on the Single-Cell Level

by Florian Mair, Jami R. Erickson, Valentin Voillet, Yannick Simoni, Timothy Bi, Aaron J. Tyznik, Jody Martin, Raphael Gottardo, Evan W. Newell, Martin Prlic
Published 2020-04-01

Mapping the Diversity of Follicular Helper T Cells in Human Blood and Tonsils Using High-Dimensional Mass Cytometry Analysis

by Michael T. Wong, Jinmiao Chen, Sriram Narayanan, Wenyu Lin, Rosslyn Anicete, Henry Tan Kun Kiaang, Maria Alicia Curotto De Lafaille, Michael Poidinger, Evan W. Newell
Published 2015-06-01

Partial absence of PD‐1 expression by tumor‐infiltrating EBV‐specific CD8+ T cells in EBV‐driven lymphoepithelioma‐like carcinoma

by Yannick Simoni, Etienne Becht, Shamin Li, Chiew Yee Loh, Joe Poh Sheng Yeong, Tony Kiat Hon Lim, Angela Takano, Daniel Shao Weng Tan, Evan W Newell
Published 2020-01-01

Late-differentiated effector neoantigen-specific CD8+ T cells are enriched in peripheral blood of non-small cell lung carcinoma patients responding to atezolizumab treatment

by Michael Fehlings, Suchit Jhunjhunwala, Marcin Kowanetz, William E. O’Gorman, Priti S. Hegde, Hermi Sumatoh, Boon Heng Lee, Alessandra Nardin, Etienne Becht, Susan Flynn, Marcus Ballinger, Evan W. Newell, Mahesh Yadav
Published 2019-09-01

Characterization of a candidate tetravalent vaccine based on 2'-O-methyltransferase mutants.

by Roland Züst, Shi-Hua Li, Xuping Xie, Sumathy Velumani, Melissa Chng, Ying-Xiu Toh, Jing Zou, Hongping Dong, Chao Shan, Jassia Pang, Cheng-Feng Qin, Evan W Newell, Pei-Yong Shi, Katja Fink
Published 2018-01-01

CD103+ Dendritic Cells Control Th17 Cell Function in the Lung

by Teresa Zelante, Alicia Yoke Wei Wong, Tang Jing Ping, Jinmiao Chen, Hermi R. Sumatoh, Elena Viganò, Yu Hong Bing, Bernett Lee, Francesca Zolezzi, Jan Fric, Evan W. Newell, Alessandra Mortellaro, Michael Poidinger, Paolo Puccetti, Paola Ricciardi-Castagnoli
Published 2015-09-01

MAIT cell clonal expansion and TCR repertoire shaping in human volunteers challenged with Salmonella Paratyphi A

by Lauren J. Howson, Giorgio Napolitani, Dawn Shepherd, Hemza Ghadbane, Prathiba Kurupati, Lorena Preciado-Llanes, Margarida Rei, Hazel C. Dobinson, Malick M. Gibani, Karen Wei Weng Teng, Evan W. Newell, Natacha Veerapen, Gurdyal S. Besra, Andrew J. Pollard, Vincenzo Cerundolo
Published 2018-01-01

Lung endothelial cell antigen cross-presentation to CD8+T cells drives malaria-associated lung injury

by Carla Claser, Samantha Yee Teng Nguee, Akhila Balachander, Shanshan Wu Howland, Etienne Becht, Bavani Gunasegaran, Siddesh V. Hartimath, Audrey W. Q. Lee, Jacqueline Theng Theng Ho, Chee Bing Ong, Evan W. Newell, Julian Goggi, Lai Guan Ng, Laurent Renia
Published 2019-09-01

Author Correction: Lung endothelial cell antigen cross-presentation to CD8+T cells drives malaria-associated lung injury

by Carla Claser, Samantha Yee Teng Nguee, Akhila Balachander, Shanshan Wu Howland, Etienne Becht, Bavani Gunasegaran, Siddesh V. Hartimath, Audrey W. Q. Lee, Jacqueline Theng Theng Ho, Chee Bing Ong, Evan W. Newell, Julian Goggi, Lai Guan Ng, Laurent Renia
Published 2019-11-01

Adaptive NKG2C+CD57+ Natural Killer Cell and Tim-3 Expression During Viral Infections

by Hassen Kared, Serena Martelli, Serena Martelli, Shu Wen Tan, Yannick Simoni, Meng Li Chong, Siew Hwei Yap, Evan W. Newell, Sylvia L. F. Pender, Adeeba Kamarulzaman, Adeeba Kamarulzaman, Reena Rajasuriar, Reena Rajasuriar, Reena Rajasuriar, Anis Larbi, Anis Larbi, Anis Larbi
Published 2018-04-01

Prognostic value of CD8 + PD-1+ immune infiltrates and PDCD1 gene expression in triple negative breast cancer

by Joe Yeong, Jeffrey Chun Tatt Lim, Bernett Lee, Huihua Li, Clara Chong Hui Ong, Aye Aye Thike, Wei Hseun Yeap, Yi Yang, Ansel Yi Herh Lim, Timothy Kwang Yong Tay, Jin Liu, Siew-Cheng Wong, Jinmiao Chen, Elaine Hsuen Lim, Jabed Iqbal, Rebecca Dent, Evan W. Newell, Puay Hoon Tan
Published 2019-02-01

Immunohistochemical scoring of CD38 in the tumor microenvironment predicts responsiveness to anti-PD-1/PD-L1 immunotherapy in hepatocellular carcinoma

by Valerie Chew, Su Pin Choo, Bernett Lee, Sahil Saraf, Harry Ho Man Ng, Ren Yuan Lee, Siting Goh, Isabel Shu Ying Tay, Sherlly Lim, Bijin Au, Josh Jie Hua Loh, John Edward Connolly, Tracy Loh, Wei Qiang Leow, Joycelyn Jie Xin Lee, Fabio Malavasi, Ser Yee Lee, Pierce Chow, Evan W Newell
Published 2020-07-01

Human Tumor-Infiltrating MAIT Cells Display Hallmarks of Bacterial Antigen Recognition in Colorectal Cancer

by Shamin Li, Yannick Simoni, Etienne Becht, Chiew Yee Loh, Naisi Li, Daniel Lachance, Si-Lin Koo, Teck Por Lim, Emile Kwong Wei Tan, Ronnie Mathew, Andrew Nguyen, Justin Golovato, Julia D. Berkson, Martin Prlic, Bernett Lee, Samuel S. Minot, Niranjan Nagarajan, Neelendu Dey, Daniel S.W. Tan, Iain B. Tan, Evan W. Newell
Published 2020-06-01