Biophysical comparison of ATP-driven proton pumping mechanisms suggests a kinetic advantage for the rotary process depending on coupling ratio.

by Ramu Anandakrishnan, Daniel M Zuckerman
Published 2017-01-01

Middle-way flexible docking: Pose prediction using mixed-resolution Monte Carlo in estrogen receptor α.

by Justin Spiriti, Sundar Raman Subramanian, Rohith Palli, Maria Wu, Daniel M Zuckerman
Published 2019-01-01

A systems-biology approach to molecular machines: Exploration of alternative transporter mechanisms.

by August George, Paola Bisignano, John M Rosenberg, Michael Grabe, Daniel M Zuckerman
Published 2020-07-01

A kinetic mechanism for enhanced selectivity of membrane transport.

by Paola Bisignano, Michael A Lee, August George, Daniel M Zuckerman, Michael Grabe, John M Rosenberg
Published 2020-07-01

Unbiased Rare Event Sampling in Spatial Stochastic Systems Biology Models Using a Weighted Ensemble of Trajectories.

by Rory M Donovan, Jose-Juan Tapia, Devin P Sullivan, James R Faeder, Robert F Murphy, Markus Dittrich, Daniel M Zuckerman
Published 2016-02-01

Connexin-46/50 in a dynamic lipid environment resolved by CryoEM at 1.9 Å

by Jonathan A. Flores, Bassam G. Haddad, Kimberly A. Dolan, Janette B. Myers, Craig C. Yoshioka, Jeremy Copperman, Daniel M. Zuckerman, Steve L. Reichow
Published 2020-08-01

High-throughput, single-particle tracking reveals nested membrane domains that dictate KRasG12D diffusion and trafficking

by Yerim Lee, Carey Phelps, Tao Huang, Barmak Mostofian, Lei Wu, Ying Zhang, Kai Tao, Young Hwan Chang, Philip JS Stork, Joe W Gray, Daniel M Zuckerman, Xiaolin Nan
Published 2019-11-01