Gene-boosted assembly of a novel bacterial genome from very short reads.

by Steven L Salzberg, Daniel D Sommer, Daniela Puiu, Vincent T Lee
Published 2008-09-01

BLAST-based validation of metagenomic sequence assignments

by Adam L. Bazinet, Brian D. Ondov, Daniel D. Sommer, Shashikala Ratnayake
Published 2018-05-01

Sequence-based predictions of lipooligosaccharide diversity in the Neisseriaceae and their implication in pathogenicity.

by Daniel C Stein, Clinton J Miller, Senthil V Bhoopalan, Daniel D Sommer
Published 2011-04-01

Comprehensive DNA signature discovery and validation.

by Adam M Phillippy, Jacquline A Mason, Kunmi Ayanbule, Daniel D Sommer, Elisa Taviani, Anwar Huq, Rita R Colwell, Ivor T Knight, Steven L Salzberg
Published 2007-05-01

Biological Sexing of a 4000-Year-Old Egyptian Mummy Head to Assess the Potential of Nuclear DNA Recovery from the Most Damaged and Limited Forensic Specimens

by Odile Loreille, Shashikala Ratnayake, Adam L. Bazinet, Timothy B. Stockwell, Daniel D. Sommer, Nadin Rohland, Swapan Mallick, Philip L.F. Johnson, Pontus Skoglund, Anthony J. Onorato, Nicholas H. Bergman, David Reich, Jodi A. Irwin
Published 2018-03-01

Deep sequencing of the oral microbiome reveals signatures of periodontal disease.

by Bo Liu, Lina L Faller, Niels Klitgord, Varun Mazumdar, Mohammad Ghodsi, Daniel D Sommer, Theodore R Gibbons, Todd J Treangen, Yi-Chien Chang, Shan Li, O Colin Stine, Hatice Hasturk, Simon Kasif, Daniel Segrè, Mihai Pop, Salomon Amar
Published 2012-01-01

Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: report from the Winter Mid-Atlantic Microbiome Meet-up, College P...

by Jacquelyn S. Meisel, Daniel J. Nasko, Brian Brubach, Victoria Cepeda-Espinoza, Jessica Chopyk, Héctor Corrada-Bravo, Marcus Fedarko, Jay Ghurye, Kiran Javkar, Nathan D. Olson, Nidhi Shah, Sarah M. Allard, Adam L. Bazinet, Nicholas H. Bergman, Alexis Brown, J. Gregory Caporaso, Sean Conlan, Jocelyne DiRuggiero, Samuel P. Forry, Nur A. Hasan, Jason Kralj, Paul M. Luethy, Donald K. Milton, Brian D. Ondov, Sarah Preheim, Shashikala Ratnayake, Stephanie M. Rogers, M. J. Rosovitz, Eric G. Sakowski, Nils Oliver Schliebs, Daniel D. Sommer, Krista L. Ternus, Gherman Uritskiy, Sean X. Zhang, Mihai Pop, Todd J. Treangen
Published 2018-11-01