The Substrates of Nonsense-Mediated mRNA Decay in Caenorhabditis elegans

by Virginia S. Muir, Audrey P. Gasch, Philip Anderson
Published 2018-01-01

Variations in stress sensitivity and genomic expression in diverse S. cerevisiae isolates.

by Daniel J Kvitek, Jessica L Will, Audrey P Gasch
Published 2008-10-01

Genotype-by-Environment-by-Environment Interactions in the Saccharomyces cerevisiae Transcriptomic Response to Alcohols and Anaerobiosis

by Maria Sardi, Molly Krause, Justin Heilberger, Audrey P. Gasch
Published 2018-12-01

Natural variation in the consequences of gene overexpression and its implications for evolutionary trajectories

by DeElegant Robinson, Michael Place, James Hose, Adam Jochem, Audrey P Gasch
Published 2021-08-01

Further support for aneuploidy tolerance in wild yeast and effects of dosage compensation on gene copy-number evolution

by Audrey P Gasch, James Hose, Michael A Newton, Maria Sardi, Mun Yong, Zhishi Wang
Published 2016-03-01

PKA and HOG signaling contribute separable roles to anaerobic xylose fermentation in yeast engineered for biofuel production.

by Ellen R Wagner, Kevin S Myers, Nicholas M Riley, Joshua J Coon, Audrey P Gasch
Published 2019-01-01

Integrated module and gene-specific regulatory inference implicates upstream signaling networks.

by Sushmita Roy, Stephen Lagree, Zhonggang Hou, James A Thomson, Ron Stewart, Audrey P Gasch
Published 2013-01-01

Dosage compensation can buffer copy-number variation in wild yeast

by James Hose, Chris Mun Yong, Maria Sardi, Zhishi Wang, Michael A Newton, Audrey P Gasch
Published 2015-05-01

Correction: Dosage compensation can buffer copy-number variation in wild yeast

by James Hose, Chris Mun Yong, Maria Sardi, Zhishi Wang, Michael A Newton, Audrey P Gasch
Published 2016-03-01

Independent Mechanisms for Acquired Salt Tolerance versus Growth Resumption Induced by Mild Ethanol Pretreatment in Saccharomyces cerevisiae

by Elizabeth A. McDaniel, Tara N. Stuecker, Manasa Veluvolu, Audrey P. Gasch, Jeffrey A. Lewis
Published 2018-11-01

Incipient balancing selection through adaptive loss of aquaporins in natural Saccharomyces cerevisiae populations.

by Jessica L Will, Hyun Seok Kim, Jessica Clarke, John C Painter, Justin C Fay, Audrey P Gasch
Published 2010-04-01

Conservation and evolution of cis-regulatory systems in ascomycete fungi.

by Audrey P Gasch, Alan M Moses, Derek Y Chiang, Hunter B Fraser, Mark Berardini, Michael B Eisen
Published 2004-12-01

Genome-wide association across Saccharomyces cerevisiae strains reveals substantial variation in underlying gene requirements for toxin tolerance.

by Maria Sardi, Vaishnavi Paithane, Michael Place, De Elegant Robinson, James Hose, Dana J Wohlbach, Audrey P Gasch
Published 2018-02-01

Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response.

by Matthew E MacGilvray, Evgenia Shishkova, Deborah Chasman, Michael Place, Anthony Gitter, Joshua J Coon, Audrey P Gasch
Published 2018-05-01

Multiple means to the same end: the genetic basis of acquired stress resistance in yeast.

by David B Berry, Qiaoning Guan, James Hose, Suraiya Haroon, Marinella Gebbia, Lawrence E Heisler, Corey Nislow, Guri Giaever, Audrey P Gasch
Published 2011-11-01

Rewired cellular signaling coordinates sugar and hypoxic responses for anaerobic xylose fermentation in yeast.

by Kevin S Myers, Nicholas M Riley, Matthew E MacGilvray, Trey K Sato, Mick McGee, Justin Heilberger, Joshua J Coon, Audrey P Gasch
Published 2019-03-01

The genetic basis of aneuploidy tolerance in wild yeast

by James Hose, Leah E Escalante, Katie J Clowers, H Auguste Dutcher, DeElegant Robinson, Venera Bouriakov, Joshua J Coon, Evgenia Shishkova, Audrey P Gasch
Published 2020-01-01

CRISpy-Pop: A Web Tool for Designing CRISPR/Cas9-Driven Genetic Modifications in Diverse Populations

by Hayley R. Stoneman, Russell L. Wrobel, Michael Place, Michael Graham, David J. Krause, Matteo De Chiara, Gianni Liti, Joseph Schacherer, Robert Landick, Audrey P. Gasch, Trey K. Sato, Chris Todd Hittinger
Published 2020-11-01

Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress.

by Audrey P Gasch, Feiqiao Brian Yu, James Hose, Leah E Escalante, Mike Place, Rhonda Bacher, Jad Kanbar, Doina Ciobanu, Laura Sandor, Igor V Grigoriev, Christina Kendziorski, Stephen R Quake, Megan N McClean
Published 2017-12-01

Genome Sequence and Analysis of a Stress-Tolerant, Wild-Derived Strain of Saccharomyces cerevisiae Used in Biofuels Research

by Sean J. McIlwain, David Peris, Maria Sardi, Oleg V. Moskvin, Fujie Zhan, Kevin S. Myers, Nicholas M. Riley, Alyssa Buzzell, Lucas S. Parreiras, Irene M. Ong, Robert Landick, Joshua J. Coon, Audrey P. Gasch, Trey K. Sato, Chris Todd Hittinger
Published 2016-06-01