The Pedant Human Genome Database ? Functional Annotation of the Human Genome

by Christine M.E. Schüller, Birgitta Geier, Andreas Fritz, Asaf Salamov, Igor Seledsov, Victor Solovyev, Dimitrij Frishman
Published 2002-01-01

Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi

by Ying Chang, D’Ann Rochon, Satoshi Sekimoto, Yan Wang, Mansi Chovatia, Laura Sandor, Asaf Salamov, Igor V. Grigoriev, Jason E. Stajich, Joseph W. Spatafora
Published 2021-02-01

Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolu...

by Javier F. Tabima, Ian A. Trautman, Ying Chang, Yan Wang, Stephen Mondo, Alan Kuo, Asaf Salamov, Igor V. Grigoriev, Jason E. Stajich, Joseph W. Spatafora
Published 2020-09-01

Widespread Polycistronic Transcripts in Fungi Revealed by Single-Molecule mRNA Sequencing.

by Sean P Gordon, Elizabeth Tseng, Asaf Salamov, Jiwei Zhang, Xiandong Meng, Zhiying Zhao, Dongwan Kang, Jason Underwood, Igor V Grigoriev, Melania Figueroa, Jonathan S Schilling, Feng Chen, Zhong Wang
Published 2015-01-01

A Genomic Catalog of Stress Response Genes in Anaerobic Fungi for Applications in Bioproduction

by Candice L. Swift, Nikola G. Malinov, Stephen J. Mondo, Stephen J. Mondo, Asaf Salamov, Igor V. Grigoriev, Igor V. Grigoriev, Igor V. Grigoriev, Michelle A. O'Malley, Michelle A. O'Malley
Published 2021-08-01

A single-cell genomics pipeline for environmental microbial eukaryotes

by Doina Ciobanu, Alicia Clum, Steven Ahrendt, William B. Andreopoulos, Asaf Salamov, Sandy Chan, C. Alisha Quandt, Brian Foster, Jan P. Meier-Kolthoff, Yung Tsu Tang, Patrick Schwientek, Gerald L. Benny, Matthew E. Smith, Diane Bauer, Shweta Deshpande, Kerrie Barry, Alex Copeland, Steven W. Singer, Tanja Woyke, Igor V. Grigoriev, Timothy Y. James, Jan-Fang Cheng
Published 2021-04-01

Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts.

by Irina S Druzhinina, Komal Chenthamara, Jian Zhang, Lea Atanasova, Dongqing Yang, Youzhi Miao, Mohammad J Rahimi, Marica Grujic, Feng Cai, Shadi Pourmehdi, Kamariah Abu Salim, Carina Pretzer, Alexey G Kopchinskiy, Bernard Henrissat, Alan Kuo, Hope Hundley, Mei Wang, Andrea Aerts, Asaf Salamov, Anna Lipzen, Kurt LaButti, Kerrie Barry, Igor V Grigoriev, Qirong Shen, Christian P Kubicek
Published 2018-04-01

Comparative genome structure, secondary metabolite, and effector coding capacity across Cochliobolus pathogens.

by Bradford J Condon, Yueqiang Leng, Dongliang Wu, Kathryn E Bushley, Robin A Ohm, Robert Otillar, Joel Martin, Wendy Schackwitz, Jane Grimwood, NurAinizzati MohdZainudin, Chunsheng Xue, Rui Wang, Viola A Manning, Braham Dhillon, Zheng Jin Tu, Brian J Steffenson, Asaf Salamov, Hui Sun, Steve Lowry, Kurt LaButti, James Han, Alex Copeland, Erika Lindquist, Kerrie Barry, Jeremy Schmutz, Scott E Baker, Lynda M Ciuffetti, Igor V Grigoriev, Shaobin Zhong, B Gillian Turgeon
Published 2013-01-01

A comparative genomics study of 23 Aspergillus species from section Flavi

by Inge Kjærbølling, Tammi Vesth, Jens C. Frisvad, Jane L. Nybo, Sebastian Theobald, Sara Kildgaard, Thomas Isbrandt Petersen, Alan Kuo, Atsushi Sato, Ellen K. Lyhne, Martin E. Kogle, Ad Wiebenga, Roland S. Kun, Ronnie J. M. Lubbers, Miia R. Mäkelä, Kerrie Barry, Mansi Chovatia, Alicia Clum, Chris Daum, Sajeet Haridas, Guifen He, Kurt LaButti, Anna Lipzen, Stephen Mondo, Jasmyn Pangilinan, Robert Riley, Asaf Salamov, Blake A. Simmons, Jon K. Magnuson, Bernard Henrissat, Uffe H. Mortensen, Thomas O. Larsen, Ronald P. de Vries, Igor V. Grigoriev, Masayuki Machida, Scott E. Baker, Mikael R. Andersen
Published 2020-02-01

The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion.

by Jeffrey J Coleman, Steve D Rounsley, Marianela Rodriguez-Carres, Alan Kuo, Catherine C Wasmann, Jane Grimwood, Jeremy Schmutz, Masatoki Taga, Gerard J White, Shiguo Zhou, David C Schwartz, Michael Freitag, Li-Jun Ma, Etienne G J Danchin, Bernard Henrissat, Pedro M Coutinho, David R Nelson, Dave Straney, Carolyn A Napoli, Bridget M Barker, Michael Gribskov, Martijn Rep, Scott Kroken, István Molnár, Christopher Rensing, John C Kennell, Jorge Zamora, Mark L Farman, Eric U Selker, Asaf Salamov, Harris Shapiro, Jasmyn Pangilinan, Erika Lindquist, Casey Lamers, Igor V Grigoriev, David M Geiser, Sarah F Covert, Esteban Temporini, Hans D Vanetten
Published 2009-08-01

Correction: The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Com...

by Pierre J G M de Wit, Ate van der Burgt, Bilal Ökmen, Ioannis Stergiopoulos, Kamel A Abd-Elsalam, Andrea L Aerts, Ali H Bahkali, Henriek G Beenen, Pranav Chettri, Murray P Cox, Erwin Datema, Ronald P de Vries, Braham Dhillon, Austen R Ganley, Scott A Griffiths, Yanan Guo, Richard C Hamelin, Bernard Henrissat, M Shahjahan Kabir, Mansoor Karimi Jashni, Gert Kema, Sylvia Klaubauf, Alla Lapidus, Anthony Levasseur, Erika Lindquist, Rahim Mehrabi, Robin A Ohm, Timothy J Owen, Asaf Salamov, Arne Schwelm, Elio Schijlen, Hui Sun, Harrold A van den Burg, Roeland C H J van Ham, Shuguang Zhang, Stephen B Goodwin, Igor V Grigoriev, Jérôme Collemare, Rosie E Bradshaw
Published 2015-12-01

The genomes of the fungal plant pathogens Cladosporium fulvum and Dothistroma septosporum reveal adaptation to different hosts and lifestyles but also signatures of common ancestry...

by Pierre J G M de Wit, Ate van der Burgt, Bilal Ökmen, Ioannis Stergiopoulos, Kamel A Abd-Elsalam, Andrea L Aerts, Ali H Bahkali, Henriek G Beenen, Pranav Chettri, Murray P Cox, Erwin Datema, Ronald P de Vries, Braham Dhillon, Austen R Ganley, Scott A Griffiths, Yanan Guo, Richard C Hamelin, Bernard Henrissat, M Shahjahan Kabir, Mansoor Karimi Jashni, Gert Kema, Sylvia Klaubauf, Alla Lapidus, Anthony Levasseur, Erika Lindquist, Rahim Mehrabi, Robin A Ohm, Timothy J Owen, Asaf Salamov, Arne Schwelm, Elio Schijlen, Hui Sun, Harrold A van den Burg, Roeland C H J van Ham, Shuguang Zhang, Stephen B Goodwin, Igor V Grigoriev, Jérôme Collemare, Rosie E Bradshaw
Published 2012-01-01

Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis.

by Stephen B Goodwin, Sarrah Ben M'barek, Braham Dhillon, Alexander H J Wittenberg, Charles F Crane, James K Hane, Andrew J Foster, Theo A J Van der Lee, Jane Grimwood, Andrea Aerts, John Antoniw, Andy Bailey, Burt Bluhm, Judith Bowler, Jim Bristow, Ate van der Burgt, Blondy Canto-Canché, Alice C L Churchill, Laura Conde-Ferràez, Hans J Cools, Pedro M Coutinho, Michael Csukai, Paramvir Dehal, Pierre De Wit, Bruno Donzelli, Henri C van de Geest, Roeland C H J van Ham, Kim E Hammond-Kosack, Bernard Henrissat, Andrzej Kilian, Adilson K Kobayashi, Edda Koopmann, Yiannis Kourmpetis, Arnold Kuzniar, Erika Lindquist, Vincent Lombard, Chris Maliepaard, Natalia Martins, Rahim Mehrabi, Jan P H Nap, Alisa Ponomarenko, Jason J Rudd, Asaf Salamov, Jeremy Schmutz, Henk J Schouten, Harris Shapiro, Ioannis Stergiopoulos, Stefano F F Torriani, Hank Tu, Ronald P de Vries, Cees Waalwijk, Sarah B Ware, Ad Wiebenga, Lute-Harm Zwiers, Richard P Oliver, Igor V Grigoriev, Gert H J Kema
Published 2011-06-01