A Framework to Simplify Combined Sampling Strategies in Rosetta.

by Justin R Porter, Brian D Weitzner, Oliver F Lange
Published 2015-01-01

Real-time PyMOL visualization for Rosetta and PyRosetta.

by Evan H Baugh, Sergey Lyskov, Brian D Weitzner, Jeffrey J Gray
Published 2011-01-01

Benchmarking and analysis of protein docking performance in Rosetta v3.2.

by Sidhartha Chaudhury, Monica Berrondo, Brian D Weitzner, Pravin Muthu, Hannah Bergman, Jeffrey J Gray
Published 2011-01-01

An Integrated Framework Advancing Membrane Protein Modeling and Design.

by Rebecca F Alford, Julia Koehler Leman, Brian D Weitzner, Amanda M Duran, Drew C Tilley, Assaf Elazar, Jeffrey J Gray
Published 2015-09-01

RosettaAntibodyDesign (RAbD): A general framework for computational antibody design.

by Jared Adolf-Bryfogle, Oleks Kalyuzhniy, Michael Kubitz, Brian D Weitzner, Xiaozhen Hu, Yumiko Adachi, William R Schief, Roland L Dunbrack
Published 2018-04-01

Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE).

by Sergey Lyskov, Fang-Chieh Chou, Shane Ó Conchúir, Bryan S Der, Kevin Drew, Daisuke Kuroda, Jianqing Xu, Brian D Weitzner, P Douglas Renfrew, Parin Sripakdeevong, Benjamin Borgo, James J Havranek, Brian Kuhlman, Tanja Kortemme, Richard Bonneau, Jeffrey J Gray, Rhiju Das
Published 2013-01-01

Anchor extension: a structure-guided approach to design cyclic peptides targeting enzyme active sites

by Parisa Hosseinzadeh, Paris R. Watson, Timothy W. Craven, Xinting Li, Stephen Rettie, Fátima Pardo-Avila, Asim K. Bera, Vikram Khipple Mulligan, Peilong Lu, Alexander S. Ford, Brian D. Weitzner, Lance J. Stewart, Adam P. Moyer, Maddalena Di Piazza, Joshua G. Whalen, Per Jr. Greisen, David W. Christianson, David Baker
Published 2021-06-01

Better together: Elements of successful scientific software development in a distributed collaborative community.

by Julia Koehler Leman, Brian D Weitzner, P Douglas Renfrew, Steven M Lewis, Rocco Moretti, Andrew M Watkins, Vikram Khipple Mulligan, Sergey Lyskov, Jared Adolf-Bryfogle, Jason W Labonte, Justyna Krys, RosettaCommons Consortium, Christopher Bystroff, William Schief, Dominik Gront, Ora Schueler-Furman, David Baker, Philip Bradley, Roland Dunbrack, Tanja Kortemme, Andrew Leaver-Fay, Charlie E M Strauss, Jens Meiler, Brian Kuhlman, Jeffrey J Gray, Richard Bonneau
Published 2020-05-01