PDBrenum: A webserver and program providing Protein Data Bank files renumbered according to their UniProt sequences.

by Bulat Faezov, Roland L Dunbrack
Published 2021-01-01

ProtCID: a data resource for structural information on protein interactions

by Qifang Xu, Roland L. Dunbrack
Published 2020-02-01

The role of balanced training and testing data sets for binary classifiers in bioinformatics.

by Qiong Wei, Roland L Dunbrack
Published 2013-01-01

The PyRosetta Toolkit: a graphical user interface for the Rosetta software suite.

by Jared Adolf-Bryfogle, Roland L Dunbrack
Published 2013-01-01

Multifaceted analysis of training and testing convolutional neural networks for protein secondary structure prediction.

by Maxim Shapovalov, Roland L Dunbrack, Slobodan Vucetic
Published 2020-01-01

A new clustering and nomenclature for beta turns derived from high-resolution protein structures.

by Maxim Shapovalov, Slobodan Vucetic, Roland L Dunbrack
Published 2019-03-01

BioAssemblyModeler (BAM): user-friendly homology modeling of protein homo- and heterooligomers.

by Maxim V Shapovalov, Qiang Wang, Qifang Xu, Mark Andrake, Roland L Dunbrack
Published 2014-01-01

Neighbor-dependent Ramachandran probability distributions of amino acids developed from a hierarchical Dirichlet process model.

by Daniel Ting, Guoli Wang, Maxim Shapovalov, Rajib Mitra, Michael I Jordan, Roland L Dunbrack
Published 2010-04-01

Protein modeling to assess the pathogenicity of rare variants of SERPINA1 in patients suspected of having Alpha 1 Antitrypsin Deficiency

by Friedrich Kueppers, Mark D. Andrake, Qifang Xu, Roland L. Dunbrack, Joannah Kim, Christopher L. Sanders
Published 2019-07-01

RosettaAntibodyDesign (RAbD): A general framework for computational antibody design.

by Jared Adolf-Bryfogle, Oleks Kalyuzhniy, Michael Kubitz, Brian D Weitzner, Xiaozhen Hu, Yumiko Adachi, William R Schief, Roland L Dunbrack
Published 2018-04-01