Proteogenomic analysis of a thermophilic bacterial consortium adapted to deconstruct switchgrass.

by Patrik D'haeseleer, John M Gladden, Martin Allgaier, Patrik S G Chain, Susannah G Tringe, Stephanie A Malfatti, Joshua T Aldrich, Carrie D Nicora, Errol W Robinson, Ljiljana Paša-Tolić, Philip Hugenholtz, Blake A Simmons, Steven W Singer
Published 2013-01-01

In-situ monitoring for liquid metal jetting using a millimeter-wave impedance diagnostic

by Tammy Chang, Saptarshi Mukherjee, Nicholas N. Watkins, David M. Stobbe, Owen Mays, Emer V. Baluyot, Andrew J. Pascall, Joseph W. Tringe
Published 2020-12-01

Geology and climate influence rhizobiome composition of the phenotypically diverse tropical tree Tabebuia heterophylla.

by Yakshi Ortiz, Carla Restrepo, Brayan Vilanova-Cuevas, Eugenio Santiago-Valentin, Susannah G Tringe, Filipa Godoy-Vitorino
Published 2020-01-01

Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate

by Patrik D’haeseleer, Jackson Z. Lee, Leslie Prufert-Bebout, Luke C. Burow, Angela M. Detweiler, Peter K. Weber, Ulas Karaoz, Eoin L. Brodie, Tijana Glavina del Rio, Susannah G. Tringe, Brad M. Bebout, Jennifer Pett-Ridge
Published 2017-11-01

Community-Driven Metadata Standards for Agricultural Microbiome Research

by J. P. Dundore-Arias, E. A. Eloe-Fadrosh, L. M. Schriml, G. A. Beattie, F. P. Brennan, P. E. Busby, R. B. Calderon, S. C. Castle, J. B. Emerson, S. E. Everhart, K. Eversole, K. E. Frost, J. R. Herr, A. I. Huerta, A. S. Iyer-Pascuzzi, A. K. Kalil, J. E. Leach, J. Leonard, J. E. Maul, B. Prithiviraj, M. Potrykus, N. R. Redekar, J. A. Rojas, K. A. T. Silverstein, D. J. Tomso, S. G. Tringe, B. A. Vinatzer, L. L. Kinkel
Published 2020-02-01

Mesophilic and thermophilic conditions select for unique but highly parallel microbial communities to perform carboxylate platform biomass conversion.

by Emily B Hollister, Andrea K Forrest, Heather H Wilkinson, Daniel J Ebbole, Susannah G Tringe, Stephanie A Malfatti, Mark T Holtzapple, Terry J Gentry
Published 2012-01-01

Major changes in microbial diversity and community composition across gut sections of a juvenile Panchlora cockroach.

by Erin A Gontang, Frank O Aylward, Camila Carlos, Tijana Glavina Del Rio, Mansi Chovatia, Alison Fern, Chien-Chi Lo, Stephanie A Malfatti, Susannah G Tringe, Cameron R Currie, Roberto Kolter
Published 2017-01-01

A metagenomic insight into freshwater methane-utilizing communities and evidence for cooperation between the Methylococcaceae and the Methylophilaceae

by David A.C. Beck, Marina G. Kalyuzhnaya, Stephanie Malfatti, Susannah G. Tringe, Tijana Glavina del Rio, Natalia Ivanova, Mary E. Lidstrom, Ludmila Chistoserdova
Published 2013-02-01

The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem

by William P. Inskeep, Zackary J. Jay, Susannah Green Tringe, Markus eHerrgard, Douglas B Rusch
Published 2013-05-01

The metagenome of an anaerobic microbial community decomposing poplar wood chips.

by Daniel van der Lelie, Safiyh Taghavi, Sean M McCorkle, Luen-Luen Li, Stephanie A Malfatti, Denise Monteleone, Bryon S Donohoe, Shi-You Ding, William S Adney, Michael E Himmel, Susannah G Tringe
Published 2012-01-01

Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems

by Sean P. Jungbluth, Tijana Glavina del Rio, Susannah G. Tringe, Ramunas Stepanauskas, Michael S. Rappé
Published 2017-04-01

H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups

by Sarah Piché-Choquette, Julien Tremblay, Susannah G. Tringe, Philippe Constant
Published 2016-03-01

Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization

by Emily Goren, Chong Wang, Zhulin He, Amy M. Sheflin, Dawn Chiniquy, Jessica E. Prenni, Susannah Tringe, Daniel P. Schachtman, Peng Liu
Published 2021-07-01

Metagenomic profiling reveals lignocellulose degrading system in a microbial community associated with a wood-feeding beetle.

by Erin D Scully, Scott M Geib, Kelli Hoover, Ming Tien, Susannah G Tringe, Kerrie W Barry, Tijana Glavina del Rio, Mansi Chovatia, Joshua R Herr, John E Carlson
Published 2013-01-01

Diversity, evolution, and classification of virophages uncovered through global metagenomics

by David Paez-Espino, Jinglie Zhou, Simon Roux, Stephen Nayfach, Georgios A. Pavlopoulos, Frederik Schulz, Katherine D. McMahon, David Walsh, Tanja Woyke, Natalia N. Ivanova, Emiley A. Eloe-Fadrosh, Susannah G. Tringe, Nikos C. Kyrpides
Published 2019-12-01

Phylogenetic and functional analysis of metagenome sequence from high-temperature archaeal habitats demonstrate linkages between metabolic potential and geochemistry

by William P. Inskeep, Zackary J Jay, Markus J Herrgard, Mark A Kozubal, Douglas B Rusch, Susannah Green Tringe, Richard E Macur, Ryan edeM. Jennings, Eric S Boyd, John R. Spear, Francisco F Roberto
Published 2013-05-01

Comparative metagenomics reveals impact of contaminants on groundwater microbiomes

by Christopher L Hemme, Qichao eTu, Zhou eShi, Yujia eQin, Weimin eGao, Ye eDeng, Ye eDeng, Joy eVan Nostrand, Liyou eWu, Zhili eHe, Patrick S G Chain, Susannah Green Tringe, Matthew W Fields, Edward eRubin, James M. Tiedje, Terry C Hazen, Adam eArkin, Jizhong eZhou
Published 2015-10-01