Characterization of antibiotic resistance and host-microbiome interactions in the human upper respiratory tract during influenza infection

by Lingdi Zhang, Christian V. Forst, Aubree Gordon, Gabrielle Gussin, Adam B. Geber, Porfirio J. Fernandez, Tao Ding, Lauren Lashua, Minghui Wang, Angel Balmaseda, Richard Bonneau, Bin Zhang, Elodie Ghedin
Published 2020-03-01

Microecological Koch’s postulates reveal that intestinal microbiota dysbiosis contributes to shrimp white feces syndrome

by Zhijian Huang, Shenzheng Zeng, Jinbo Xiong, Dongwei Hou, Renjun Zhou, Chengguang Xing, Dongdong Wei, Xisha Deng, Lingfei Yu, Hao Wang, Zhixuan Deng, Shaoping Weng, Satapornvanit Kriengkrai, Daliang Ning, Jizhong Zhou, Jianguo He
Published 2020-03-01

Gut microbiota and cardiovascular disease: opportunities and challenges

by Negin Kazemian, Morteza Mahmoudi, Frank Halperin, Joseph C. Wu, Sepideh Pakpour
Published 2020-03-01

Lifting the veil on arid-to-hyperarid Antarctic soil microbiomes: a tale of two oases

by Eden Zhang, Loïc M. Thibaut, Aleks Terauds, Mark Raven, Mark M. Tanaka, Josie van Dorst, Sin Yin Wong, Sally Crane, Belinda C. Ferrari
Published 2020-03-01

Nasal commensal Staphylococcus epidermidis enhances interferon-λ-dependent immunity against influenza virus

by Hyun Jik Kim, Ara Jo, Yung Jin Jeon, Sujin An, Kang-Mu Lee, Sang Sun Yoon, Jae Young Choi
Published 2019-05-01

Gut microbiota from persons with attention-deficit/hyperactivity disorder affects the brain in mice

by Anouk C. Tengeler, Sarita A. Dam, Maximilian Wiesmann, Jilly Naaijen, Miranda van Bodegom, Clara Belzer, Pieter J. Dederen, Vivienne Verweij, Barbara Franke, Tamas Kozicz, Alejandro Arias Vasquez, Amanda J. Kiliaan
Published 2020-04-01

Enterobacteriaceae are essential for the modulation of colitis severity by fungi

by Bruno Sovran, Julien Planchais, Sarah Jegou, Marjolene Straube, Bruno Lamas, Jane Mea Natividad, Allison Agus, Louise Dupraz, Jérémy Glodt, Grégory Da Costa, Marie-Laure Michel, Philippe Langella, Mathias L. Richard, Harry Sokol
Published 2018-09-01

Identification and reconstruction of novel antibiotic resistance genes from metagenomes

by Fanny Berglund, Tobias Österlund, Fredrik Boulund, Nachiket P. Marathe, D. G. Joakim Larsson, Erik Kristiansson
Published 2019-04-01

Prebiotic supplementation in frail older people affects specific gut microbiota taxa but not global diversity

by Tam T. T. Tran, Fabien J. Cousin, Denise B. Lynch, Ravi Menon, Jennifer Brulc, Jillian R.-M. Brown, Eileen O’Herlihy, Ludovica F. Butto, Katie Power, Ian B. Jeffery, Eibhlís M. O’Connor, Paul W. O’Toole
Published 2019-03-01

Predicting recurrence of Clostridium difficile infection following encapsulated fecal microbiota transplantation

by Christopher Staley, Thomas Kaiser, Byron P. Vaughn, Carolyn T. Graiziger, Matthew J. Hamilton, Tauseef ur Rehman, Kevin Song, Alexander Khoruts, Michael J. Sadowsky
Published 2018-09-01

Metagenomic reconstructions of gut microbial metabolism in weanling pigs

by Weilan Wang, Huifeng Hu, Ruurd T. Zijlstra, Jinshui Zheng, Michael G. Gänzle
Published 2019-03-01

Communicating the promise, risks, and ethics of large-scale, open space microbiome and metagenome research

by Daria Shamarina, Iana Stoyantcheva, Christopher E. Mason, Kyle Bibby, Eran Elhaik
Published 2017-10-01

Multi-omics reveals that the rumen microbiome and its metabolome together with the host metabolome contribute to individualized dairy cow performance

by Ming-Yuan Xue, Hui-Zeng Sun, Xue-Hui Wu, Jian-Xin Liu, Le Luo Guan
Published 2020-05-01

Rhizosphere microbiomes diverge among Populus trichocarpa plant-host genotypes and chemotypes, but it depends on soil origin

by Allison M. Veach, Reese Morris, Daniel Z. Yip, Zamin K. Yang, Nancy L. Engle, Melissa A. Cregger, Timothy J. Tschaplinski, Christopher W. Schadt
Published 2019-05-01

The human gallbladder microbiome is related to the physiological state and the biliary metabolic profile

by Natalia Molinero, Lorena Ruiz, Christian Milani, Isabel Gutiérrez-Díaz, Borja Sánchez, Marta Mangifesta, José Segura, Isabel Cambero, Ana Belén Campelo, Carmen María García-Bernardo, Ana Cabrera, José Ignacio Rodríguez, Sonia González, Juan Miguel Rodríguez, Marco Ventura, Susana Delgado, Abelardo Margolles
Published 2019-07-01

Mining, analyzing, and integrating viral signals from metagenomic data

by Tingting Zheng, Jun Li, Yueqiong Ni, Kang Kang, Maria-Anna Misiakou, Lejla Imamovic, Billy K. C. Chow, Anne A. Rode, Peter Bytzer, Morten Sommer, Gianni Panagiotou
Published 2019-03-01

Conserved phylogenetic distribution and limited antibiotic resistance of class 1 integrons revealed by assessing the bacterial genome and plasmid collection

by An Ni Zhang, Li-Guan Li, Liping Ma, Michael R. Gillings, James M. Tiedje, Tong Zhang
Published 2018-07-01

Consistent responses of soil microbial taxonomic and functional attributes to mercury pollution across China

by Yu-Rong Liu, Manuel Delgado-Baquerizo, Li Bi, Jun Zhu, Ji-Zheng He
Published 2018-10-01

Laboratory colonization stabilizes the naturally dynamic microbiome composition of field collected Dermacentor andersoni ticks

by Cory A. Gall, Glen A. Scoles, Krisztian Magori, Kathleen L. Mason, Kelly A. Brayton
Published 2017-10-01

No evidence for Wolbachia as a nutritional co-obligate endosymbiont in the aphid Pentalonia nigronervosa

by Alejandro Manzano-Marín
Published 2020-05-01