A consensus-based ensemble approach to improve transcriptome assembly

A consensus-based ensemble approach to improve transcriptome assembly

Background: Systems-level analyses, such as differential gene expression analysis, co-expression analysis, and metabolic pathway reconstruction, depend on the accuracy of the transcriptome. Multiple tools exist to perform transcriptome assembly from RNAseq data. However, assembling high quality tran...

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Bibliographic Details
Main Authors: Behera, S. (Author), Cahoon, E.B (Author), Deogun, J.S (Author), Kapil, K. (Author), Li, X. (Author), Moriyama, E.N (Author), Shanklin, J. (Author), Voshall, A. (Author), Yu, X.-H (Author)
Format: Article
Language:English
Published: BioMed Central Ltd 2021
Subjects:
Benchmarking
consensus
Consensus
De novo assemblies
De novo assembly
Ensemble assembly
Gene expression
genome
Genome
Genome-guided assembly
Illumina
Performance
Pipelines
Rnaseq
RNAseq
RNA-Seq datum
Simulation
transcriptome
Transcriptome
Transcriptome assemblies
Transcriptome assembly
Transcriptomes
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