CONSULT: Accurate contamination removal using locality-sensitive hashing
A fundamental question appears in many bioinformatics applications: Does a sequencing read belong to a large dataset of genomes from some broad taxonomic group, even when the closest match in the set is evolutionarily divergent from the query? For example, low-coverage genome sequencing (skimming) p...
Main Authors: | Bafna, V. (Author), Mirarab, S. (Author), Rachtman, E. (Author) |
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Format: | Article |
Language: | English |
Published: |
Oxford University Press
2021
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Subjects: | |
Online Access: | View Fulltext in Publisher |
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