CONSULT: Accurate contamination removal using locality-sensitive hashing

A fundamental question appears in many bioinformatics applications: Does a sequencing read belong to a large dataset of genomes from some broad taxonomic group, even when the closest match in the set is evolutionarily divergent from the query? For example, low-coverage genome sequencing (skimming) p...

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Bibliographic Details
Main Authors: Bafna, V. (Author), Mirarab, S. (Author), Rachtman, E. (Author)
Format: Article
Language:English
Published: Oxford University Press 2021
Subjects:
Online Access:View Fulltext in Publisher