Functional analysis of IP3 receptors
I developed a high-throughput fluorescence polarisation (FP) binding assay using fluorescein-IP<sub>3</sub> and purified N-terminal fragments of IP<sub>3</sub>R to examine the thermodynamics of ligand binding to IP<sub>3</sub>R. I demonstrate that at 4°C, equilibr...
Main Author: | |
---|---|
Published: |
University of Cambridge
2010
|
Subjects: | |
Online Access: | http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.598546 |
id |
ndltd-bl.uk-oai-ethos.bl.uk-598546 |
---|---|
record_format |
oai_dc |
spelling |
ndltd-bl.uk-oai-ethos.bl.uk-5985462015-03-20T05:51:05ZFunctional analysis of IP3 receptorsDing, Z.2010I developed a high-throughput fluorescence polarisation (FP) binding assay using fluorescein-IP<sub>3</sub> and purified N-terminal fragments of IP<sub>3</sub>R to examine the thermodynamics of ligand binding to IP<sub>3</sub>R. I demonstrate that at 4°C, equilibrium competition binding using <sup>3</sup>H-IP<sub>3</sub> and the FP assay provided similar estimates of the equilibrium dissociation constants (K<sub>D</sub>) for a variety of ligands. I showed that the IBC alone is sufficient for high-affinity binding of adenophostin A (AdA). Similar amounts of binding energy are diverted into rearranging the SD for IP<sub>3</sub> and AdA, but they are distinguished by their binding enthalpy and entropy changes. I revealed that the enthalpy and entropy changes of the binding of 2-O-modified IP<sub>3</sub> analogues are different, despite their similar free energy changes. These results prompted me to propose a new model to explain partial agonism of IP<sub>3</sub>R. Different cell-surface receptors have been reported to evoke Ca<sup>2+</sup> release from different IP<sub>3</sub>-sensitive Ca<sup>2+</sup> stores. I examined this phenomenon in fura 2-loaded HEK cells. Combined maximal concentrations of ATP and carbachol (CCh) evoked a Ca<sup>2+</sup><sub> </sub>response that was larger than the response to either alone, but smaller than the sum of the responses. In the absence of extracellular Ca<sup>2+</sup>, ATP evoked a Ca<sup>2+</sup> release that was significantly larger than CCh in cells pretreated with CCh, but smaller than the ATP response in naïve cells. In the absence of extracellular Ca<sup>2+</sup>, CCh evoked a Ca<sup>2+</sup> release that was significantly larger than ATP in cells pretreated with ATP, but smaller than the CCh response in naïve cells. These results suggest the existence of discrete agonist-specific Ca<sup>2+</sup>-stores that partially overlap.572University of Cambridgehttp://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.598546Electronic Thesis or Dissertation |
collection |
NDLTD |
sources |
NDLTD |
topic |
572 |
spellingShingle |
572 Ding, Z. Functional analysis of IP3 receptors |
description |
I developed a high-throughput fluorescence polarisation (FP) binding assay using fluorescein-IP<sub>3</sub> and purified N-terminal fragments of IP<sub>3</sub>R to examine the thermodynamics of ligand binding to IP<sub>3</sub>R. I demonstrate that at 4°C, equilibrium competition binding using <sup>3</sup>H-IP<sub>3</sub> and the FP assay provided similar estimates of the equilibrium dissociation constants (K<sub>D</sub>) for a variety of ligands. I showed that the IBC alone is sufficient for high-affinity binding of adenophostin A (AdA). Similar amounts of binding energy are diverted into rearranging the SD for IP<sub>3</sub> and AdA, but they are distinguished by their binding enthalpy and entropy changes. I revealed that the enthalpy and entropy changes of the binding of 2-O-modified IP<sub>3</sub> analogues are different, despite their similar free energy changes. These results prompted me to propose a new model to explain partial agonism of IP<sub>3</sub>R. Different cell-surface receptors have been reported to evoke Ca<sup>2+</sup> release from different IP<sub>3</sub>-sensitive Ca<sup>2+</sup> stores. I examined this phenomenon in fura 2-loaded HEK cells. Combined maximal concentrations of ATP and carbachol (CCh) evoked a Ca<sup>2+</sup><sub> </sub>response that was larger than the response to either alone, but smaller than the sum of the responses. In the absence of extracellular Ca<sup>2+</sup>, ATP evoked a Ca<sup>2+</sup> release that was significantly larger than CCh in cells pretreated with CCh, but smaller than the ATP response in naïve cells. In the absence of extracellular Ca<sup>2+</sup>, CCh evoked a Ca<sup>2+</sup> release that was significantly larger than ATP in cells pretreated with ATP, but smaller than the CCh response in naïve cells. These results suggest the existence of discrete agonist-specific Ca<sup>2+</sup>-stores that partially overlap. |
author |
Ding, Z. |
author_facet |
Ding, Z. |
author_sort |
Ding, Z. |
title |
Functional analysis of IP3 receptors |
title_short |
Functional analysis of IP3 receptors |
title_full |
Functional analysis of IP3 receptors |
title_fullStr |
Functional analysis of IP3 receptors |
title_full_unstemmed |
Functional analysis of IP3 receptors |
title_sort |
functional analysis of ip3 receptors |
publisher |
University of Cambridge |
publishDate |
2010 |
url |
http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.598546 |
work_keys_str_mv |
AT dingz functionalanalysisofip3receptors |
_version_ |
1716794545113399296 |