Molecular Dynamics of the RNA Binding Cavity of Influenza A Non-structural Protein 1 (NS1) RNA Binding Domain

Molecular dynamics simulations were performed on the influenza A non-structural protein 1 (NS1) RNA binding domain (RBD), a homodimer. Fourteen simulations were performed at 298K, nine ionized with 0.1M KCl and five with no ions. Several analysis techniques were employed to study RBD residue flexibi...

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Bibliographic Details
Main Author: Whittington, Christi Leigh
Format: Others
Published: Scholar Commons 2012
Subjects:
Online Access:http://scholarcommons.usf.edu/etd/4256
http://scholarcommons.usf.edu/cgi/viewcontent.cgi?article=5452&context=etd