Studies on potential APC/β-catenin target genes in the Notch pathway

Both Notch and the Wnt pathways are key regulators in maintaining the homeostasis in the intestine. Defects on the key tumor suppressor adenomatous polyposis coli, APC a gene in the Wnt pathway is most frequently mutated in colorectal cancer. Previous studies have indicated that there is a crosstalk...

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Main Author: Grünberg, John
Format: Others
Language:English
Published: Linköpings universitet, Institutionen för fysik, kemi och biologi 2009
Subjects:
Wnt
APC
Online Access:http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-18443
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spelling ndltd-UPSALLA1-oai-DiVA.org-liu-184432013-01-08T13:34:54ZStudies on potential APC/β-catenin target genes in the Notch pathwayengGrünberg, JohnLinköpings universitet, Institutionen för fysik, kemi och biologi2009NotchWntAPCβ-cateninColorectal cancerHT29LEF1/TcfNATURAL SCIENCESNATURVETENSKAPBoth Notch and the Wnt pathways are key regulators in maintaining the homeostasis in the intestine. Defects on the key tumor suppressor adenomatous polyposis coli, APC a gene in the Wnt pathway is most frequently mutated in colorectal cancer. Previous studies have indicated that there is a crosstalk between these two pathways. We investigate if there is correlation by first using bioinformatics to find Lef1/Tcf sites in several of the Notch pathway gene promoters. Bioinformatically we found that a lot of the genes contained theses sites controlled by the APC's destruction target β-catenin. By using semi quantitative PCR and western blot we found that Hes 1, Hes 7, JAG 2, MAML 1, Notch 2, NUMB, NUMBL, RFNG and LFNG was downregulated in HT29 colon cancer cells carrying a vector containing wild type APC. All but JAG 2 contains at least one Lef1/Tcf site in their promoter region. The results were verified in HT29 cells transfected with siRNA against β-catenin. We also investigated what would happen to the Lef1/Tcf target gene program of the Wnt pathway, if the Notch pathway was inhibited with the gamma-secretase inhibitor DAPT. Results showed no downregulution of β-catenin or its target gene Cyclin D1.Taken together, these results demonstrate that the Wnt pathway can be placed upstream of the Notch pathway and regulates the latter through β-catenin and the Lef1/Tcf target gene program. However, preliminary results indicate that there is no regulation of APC/β-catenin by the Notch pathway. Student thesisinfo:eu-repo/semantics/bachelorThesistexthttp://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-18443application/pdfinfo:eu-repo/semantics/openAccess
collection NDLTD
language English
format Others
sources NDLTD
topic Notch
Wnt
APC
β-catenin
Colorectal cancer
HT29
LEF1/Tcf
NATURAL SCIENCES
NATURVETENSKAP
spellingShingle Notch
Wnt
APC
β-catenin
Colorectal cancer
HT29
LEF1/Tcf
NATURAL SCIENCES
NATURVETENSKAP
Grünberg, John
Studies on potential APC/β-catenin target genes in the Notch pathway
description Both Notch and the Wnt pathways are key regulators in maintaining the homeostasis in the intestine. Defects on the key tumor suppressor adenomatous polyposis coli, APC a gene in the Wnt pathway is most frequently mutated in colorectal cancer. Previous studies have indicated that there is a crosstalk between these two pathways. We investigate if there is correlation by first using bioinformatics to find Lef1/Tcf sites in several of the Notch pathway gene promoters. Bioinformatically we found that a lot of the genes contained theses sites controlled by the APC's destruction target β-catenin. By using semi quantitative PCR and western blot we found that Hes 1, Hes 7, JAG 2, MAML 1, Notch 2, NUMB, NUMBL, RFNG and LFNG was downregulated in HT29 colon cancer cells carrying a vector containing wild type APC. All but JAG 2 contains at least one Lef1/Tcf site in their promoter region. The results were verified in HT29 cells transfected with siRNA against β-catenin. We also investigated what would happen to the Lef1/Tcf target gene program of the Wnt pathway, if the Notch pathway was inhibited with the gamma-secretase inhibitor DAPT. Results showed no downregulution of β-catenin or its target gene Cyclin D1.Taken together, these results demonstrate that the Wnt pathway can be placed upstream of the Notch pathway and regulates the latter through β-catenin and the Lef1/Tcf target gene program. However, preliminary results indicate that there is no regulation of APC/β-catenin by the Notch pathway.
author Grünberg, John
author_facet Grünberg, John
author_sort Grünberg, John
title Studies on potential APC/β-catenin target genes in the Notch pathway
title_short Studies on potential APC/β-catenin target genes in the Notch pathway
title_full Studies on potential APC/β-catenin target genes in the Notch pathway
title_fullStr Studies on potential APC/β-catenin target genes in the Notch pathway
title_full_unstemmed Studies on potential APC/β-catenin target genes in the Notch pathway
title_sort studies on potential apc/β-catenin target genes in the notch pathway
publisher Linköpings universitet, Institutionen för fysik, kemi och biologi
publishDate 2009
url http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-18443
work_keys_str_mv AT grunbergjohn studiesonpotentialapcbcatenintargetgenesinthenotchpathway
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