Accelerated Large-Scale Multiple Sequence Alignment with Reconfigurable Computing

Accelerated Large-Scale Multiple Sequence Alignment with Reconfigurable Computing

Multiple Sequence Alignment (MSA) is a fundamental analysis method used in bioinformatics and many comparative genomic applications. The time to compute an optimal MSA grows exponentially with respect to the number of sequences. Consequently, producing timely results on large problems requires more...

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Bibliographic Details
Main Author: Lloyd, G Scott
Format: Others
Published: BYU ScholarsArchive 2011
Subjects:
communication network
communication protocol
computer architecture
interface
modules
dynamic programming
field-programmable gate array
FPGA
sequence alignment
reconfigurable hardware
traceback
Computer Sciences
Online Access:https://scholarsarchive.byu.edu/etd/2729
https://scholarsarchive.byu.edu/cgi/viewcontent.cgi?article=3728&context=etd

Internet

https://scholarsarchive.byu.edu/etd/2729
https://scholarsarchive.byu.edu/cgi/viewcontent.cgi?article=3728&context=etd

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