Predicting pathogenicity behavior in Escherichia coli population through a state dependent model and TRS profiling.

The Binary State Speciation and Extinction (BiSSE) model is a branching process based model that allows the diversification rates to be controlled by a binary trait. We develop a general approach, based on the BiSSE model, for predicting pathogenicity in bacterial populations from microsatellites pr...

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Bibliographic Details
Main Authors: Krzysztof Bartoszek, Marta Majchrzak, Sebastian Sakowski, Anna B Kubiak-Szeligowska, Ingemar Kaj, Pawel Parniewski
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2018-01-01
Series:PLoS Computational Biology
Online Access:http://europepmc.org/articles/PMC5809097?pdf=render