JANE: efficient mapping of prokaryotic ESTs and variable length sequence reads on related template genomes

<p>Abstract</p> <p>Background</p> <p>ESTs or variable sequence reads can be available in prokaryotic studies well before a complete genome is known. Use cases include (i) transcriptome studies or (ii) single cell sequencing of bacteria. Without suitable software their f...

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Bibliographic Details
Main Authors: L&#243;pez-S&#225;nchez Mar&#237;a, Moya Andres, Bernhardt J&#246;rg, Gross Roy, Liang Chunguang, Schmid Alexander, Dandekar Thomas
Format: Article
Language:English
Published: BMC 2009-01-01
Series:BMC Bioinformatics
Online Access:http://www.biomedcentral.com/1471-2105/10/391