Scavenger: A pipeline for recovery of unaligned reads utilising similarity with aligned reads [version 1; peer review: 2 approved]

Read alignment is an important step in RNA-seq analysis as the result of alignment forms the basis for downstream analyses. However, recent studies have shown that published alignment tools have variable mapping sensitivity and do not necessarily align all the reads which should have been aligned, a...

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Bibliographic Details
Main Authors: Andrian Yang, Joshua Y. S. Tang, Michael Troup, Joshua W. K. Ho
Format: Article
Language:English
Published: F1000 Research Ltd 2019-09-01
Series:F1000Research
Online Access:https://f1000research.com/articles/8-1587/v1