Predicting Protein Interactions by Brownian Dynamics Simulations
We present a newly adapted Brownian-Dynamics (BD)-based protein docking method for predicting native protein complexes. The approach includes global BD conformational sampling, compact complex selection, and local energy minimization. In order to reduce the computational costs for energy evaluations...
Main Authors: | Xuan-Yu Meng, Yu Xu, Hong-Xing Zhang, Mihaly Mezei, Meng Cui |
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Format: | Article |
Language: | English |
Published: |
Hindawi Limited
2012-01-01
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Series: | Journal of Biomedicine and Biotechnology |
Online Access: | http://dx.doi.org/10.1155/2012/121034 |
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