Predicting Protein Interactions by Brownian Dynamics Simulations

We present a newly adapted Brownian-Dynamics (BD)-based protein docking method for predicting native protein complexes. The approach includes global BD conformational sampling, compact complex selection, and local energy minimization. In order to reduce the computational costs for energy evaluations...

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Bibliographic Details
Main Authors: Xuan-Yu Meng, Yu Xu, Hong-Xing Zhang, Mihaly Mezei, Meng Cui
Format: Article
Language:English
Published: Hindawi Limited 2012-01-01
Series:Journal of Biomedicine and Biotechnology
Online Access:http://dx.doi.org/10.1155/2012/121034